HLCT5BCX2_l01_n02_TR_199-7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HLCT5BCX2_l01_n02_TR_199-7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1065731
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACATTCTACTGAACAACCAATTGGGTTCGTGGGCAAACCAAAATAGGAAC	1645	0.1543541475287854	No Hit
ACCCCTTACTTGGATGGACTTGACAGATACACACAGAACCCTCCATCCAA	1546	0.14506474898449984	No Hit
TTACCCACCCAGCATGGAGCAACTAAATATGTAGAGCATATATGAACAAA	1516	0.14224977972865574	No Hit
GTTATGTGTTGGCCTTTGGCTCAAGTCATGAATTTAGGGTCCTGGAATTG	1474	0.138308822770474	No Hit
GTAGCATGTTGTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTCTTCTTG	1457	0.13671367352549565	No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG	1316	0.12348331802302832	No Hit
TCTACTAACTTTGGACTTTATTTGTTCTTTTCTGTTTCCTTGAGGTATCA	1240	0.1163520625748899	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	1144	0.10734416095618876	No Hit
GCAGTGCAGCAACTAAATATGTAGAGCATATATGAACAAACCTAAGAGAA	1083	0.1016203901359724	No Hit
GATATGTTCCTTCTATTAACTTTGGACTTTATTTGTTCTTTTCTGTTTCC	1081	0.10143272551891612	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCGAA	240	0.0	111.77153	1
CGAAAGC	520	0.0	66.907776	3
AGCGAAA	535	0.0	65.04713	1
CAGTCGG	220	0.0	62.608143	4
GCGAAAG	575	0.0	60.50506	2
GTTACGT	145	0.0	60.00037	1
GTAATGC	195	0.0	59.48755	1
AGTCGGC	210	0.0	58.688084	5
TTACGTG	150	0.0	57.984016	2
GTCACGT	220	0.0	56.02307	1
GGACCGT	65	1.0936528E-5	55.769577	1
CGAAGCG	130	1.8189894E-12	55.766956	5
GATATAC	395	0.0	55.050705	3
GTCGGTA	40	0.0060508447	54.37534	1
GTCGTCT	40	0.006059844	54.354916	145
TACGTGT	165	0.0	52.715218	3
GGTTATA	170	0.0	51.17679	1
GAGCAAA	2970	0.0	46.868973	1
AAGCGGG	290	0.0	44.99605	7
AAGCAGG	3620	0.0	44.257164	7