HL7T3BGXY_n01_sv153.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HL7T3BGXY_n01_sv153.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70195671
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	725688	1.033807341196297	TruSeq Adapter, Index 11 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGCTAC	80675	42.83796	33
ACGGCTA	81550	42.695156	32
GATCGGA	83175	42.61882	1
CTCGTAT	81275	42.3545	42
TCGTATG	81800	42.352066	43
TCTCGTA	81125	42.334297	41
CGTATGC	81835	42.33389	44
CGTCTGA	83350	42.322895	16
ATCGGAA	84975	42.20944	2
TCACGGC	82720	42.121075	30
GTCACGG	83010	42.04972	29
ACGTCTG	84265	41.90377	15
CACGGCT	83430	41.762676	31
ACACGTC	85140	41.59512	13
ATCTCGT	82545	41.566036	40
TCGGAAG	86210	41.528065	3
AGTCACG	84190	41.513775	28
CATCTCG	82715	41.494293	39
CGGAAGA	86455	41.345608	4
GTATGCC	85490	40.60029	45