HL7T3BGXY_n01_ba49.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HL7T3BGXY_n01_ba49.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37113165
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGCC	688450	1.8550021266038614	TruSeq Adapter, Index 1 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	77910	43.341423	1
ATCGGAA	79350	43.060177	2
TCGTATG	77430	42.908928	43
TCTCGTA	75690	42.862404	41
CTCGTAT	76105	42.854992	42
CGATCTC	75330	42.754547	38
CGTATGC	77840	42.73194	44
CGTCTGA	78775	42.695713	16
CACGATC	75590	42.598675	36
ACGATCT	75565	42.59776	37
GATCTCG	75835	42.552853	39
ACACGTC	79360	42.50335	13
TCACGAT	77175	42.49914	35
ATCACGA	77860	42.42238	34
ATCTCGT	76135	42.396885	40
TCGGAAG	80515	42.361443	3
ACGTCTG	79520	42.32989	15
CATCACG	78695	42.205795	33
CGGAAGA	80845	42.118942	4
GTATGCC	79155	42.076042	45