HL7MJBGXY_n01_chl23.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HL7MJBGXY_n01_chl23.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11843937
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATCTCGTATGC	89568	0.7562350255662454	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	10400	63.502647	46
GTATGCC	11050	59.8949	45
ATGCCGT	11430	57.872044	47
CGTATGC	11515	57.50613	44
TGCCGTC	11700	56.567165	48
TCGTATG	12155	54.62221	43
GCCGTCT	12315	53.713608	49
CTCGTAT	12475	52.4627	42
AAAAGGG	13380	49.149837	70
TCTCGTA	14155	46.236115	41
CGAGTGG	15065	43.83761	33
CCGTCTT	15440	42.979084	50
TGAAAAA	15600	42.634315	62
AAAAAGG	15745	41.94629	69
ATCTCGT	15895	41.30666	40
ACGAGTG	16340	40.609756	32
AGTGGAT	16330	40.50535	35
GATCTCG	16590	39.51292	39
CACGAGT	16860	39.460716	31
CTGCTTG	17075	39.07326	57