Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HL5HLBGXN_n01_BxNoRep1Old HL5HLBGXN_n01_BxNoRep1Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 2914784.0 0.0 37.0 48.0 99.5891363575416 37.0 pass fail pass warn warn pass pass pass pass pass pass HL5HLBGXN_n01_BxNoRep2New HL5HLBGXN_n01_BxNoRep2New.fastq.gz Conventional base calls Sanger / Illumina 1.9 58102.0 0.0 37.0 49.0 99.01380331141785 37.0 pass fail fail warn fail pass pass pass pass pass pass HL5HLBGXN_n01_BxNoRep3New HL5HLBGXN_n01_BxNoRep3New.fastq.gz Conventional base calls Sanger / Illumina 1.9 169168.0 0.0 37.0 51.0 95.69111610343403 37.0 pass fail warn warn fail pass pass pass pass pass pass HL5HLBGXN_n01_BxNoRep3Old HL5HLBGXN_n01_BxNoRep3Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 6789898.0 0.0 37.0 46.0 99.7710753266927 37.0 pass fail pass warn warn pass pass pass pass pass pass HL5HLBGXN_n01_BxPlusRep1New HL5HLBGXN_n01_BxPlusRep1New.fastq.gz Conventional base calls Sanger / Illumina 1.9 89481.0 0.0 37.0 50.0 96.52551938400332 37.0 pass fail fail warn fail pass pass pass pass pass pass HL5HLBGXN_n01_BxPlusRep1Old HL5HLBGXN_n01_BxPlusRep1Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 3871559.0 0.0 37.0 47.0 99.92695886672958 37.0 pass fail pass warn warn pass pass pass pass pass pass HL5HLBGXN_n01_BxPlusRep2New HL5HLBGXN_n01_BxPlusRep2New.fastq.gz Conventional base calls Sanger / Illumina 1.9 230123.0 0.0 37.0 52.0 98.06743304422713 37.0 pass fail warn warn fail pass pass pass pass pass pass HL5HLBGXN_n01_BxPlusRep2Old HL5HLBGXN_n01_BxPlusRep2Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 3206262.0 0.0 37.0 47.0 99.91733458800769 37.0 pass fail pass warn warn pass pass pass pass pass pass HL5HLBGXN_n01_undetermined HL5HLBGXN_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 28388311.0 0.0 37.0 49.0 99.74450969916988 37.0 pass fail pass warn warn pass pass pass pass pass pass HL5HLBGXN_n02_BxNoRep1Old HL5HLBGXN_n02_BxNoRep1Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 2914784.0 0.0 37.0 44.0 99.81146482570755 37.0 pass fail pass warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxNoRep2New HL5HLBGXN_n02_BxNoRep2New.fastq.gz Conventional base calls Sanger / Illumina 1.9 58102.0 0.0 37.0 45.0 99.52669443392654 37.0 pass fail fail warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxNoRep3New HL5HLBGXN_n02_BxNoRep3New.fastq.gz Conventional base calls Sanger / Illumina 1.9 169168.0 0.0 37.0 47.0 98.02873289645419 37.0 pass fail warn warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxNoRep3Old HL5HLBGXN_n02_BxNoRep3Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 6789898.0 0.0 37.0 42.0 99.85663399293657 37.0 pass fail pass warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxPlusRep1New HL5HLBGXN_n02_BxPlusRep1New.fastq.gz Conventional base calls Sanger / Illumina 1.9 89481.0 0.0 37.0 47.0 98.26778869257161 37.0 pass fail fail warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxPlusRep1Old HL5HLBGXN_n02_BxPlusRep1Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 3871559.0 0.0 37.0 42.0 99.96072214692336 37.0 pass fail pass warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxPlusRep2New HL5HLBGXN_n02_BxPlusRep2New.fastq.gz Conventional base calls Sanger / Illumina 1.9 230123.0 0.0 37.0 47.0 99.16520405055545 37.0 pass fail warn warn fail pass pass pass pass pass pass HL5HLBGXN_n02_BxPlusRep2Old HL5HLBGXN_n02_BxPlusRep2Old.fastq.gz Conventional base calls Sanger / Illumina 1.9 3206262.0 0.0 37.0 42.0 99.94358106088687 37.0 pass fail pass warn fail pass pass pass pass pass pass HL5HLBGXN_n02_undetermined HL5HLBGXN_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 28388311.0 0.0 37.0 44.0 99.8322275288764 37.0 pass fail pass warn fail pass pass pass pass pass pass