FastQCFastQC Report
Mon 9 Oct 2023
HL557DRX3_n01_Ctrl16.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHL557DRX3_n01_Ctrl16.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6722459
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGACGCTAATCTCGTAT1494482.223115083334833TruSeq Adapter, Index 4 (97% over 37bp)
GATCGGACGAGCACACGTCTGAACTCCAGTCACAGACGCTAATCTCGTAT83530.12425512747641897TruSeq Adapter, Index 13 (97% over 35bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)