FastQCFastQC Report
Tue 3 Oct 2023
HL553DRX3_n01_S3_D7_452_GEX.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHL553DRX3_n01_S3_D7_452_GEX.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221634888
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGGCTGTTAATTGTCAGTTCAGTG6068680.27381429226972603No Hit
GTGCGGTGCGTGACGGGCGAGGGGGC5310870.23962247315503865No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT3501460.15798325036264146No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)