FastQCFastQC Report
Tue 3 Oct 2023
HL553DRX3_n01_S3_D7_452_BCell.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHL553DRX3_n01_S3_D7_452_BCell.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70496167
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGGCTGTTAATTGTCAGTTCAGTG9638241.367200574181572No Hit
CCTCTATATAAATGCGTAGGGGTTTT1212270.1719625408853789No Hit
TGTTGGTTGATTGTAGATATTGGGCT1130730.16039595457721836No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT910710.12918574707756805No Hit
TGCTGTTAATTGTCAGTTCAGTGTTT908510.12887367337290836No Hit
TGCTGCTTTTAGGCCTACTATGGGTG906840.1286367810607348No Hit
AGTGAGGGTAATAATGACTTGTTGGT830980.11787591231733209No Hit
TGCGCTTACTTTGTAGCCTTCATCAG729260.10344675902733833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)