FastQCFastQC Report
Tue 3 Oct 2023
HL553DRX3_n01_S1_D0_452_TCell.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHL553DRX3_n01_S1_D0_452_TCell.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98096994
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA2234740.22780922318577876No Hit
GCACCTGCGGCGGCTCCACCCGGGCC2007470.20464133692006914No Hit
TGTTCGTTATCGGAATTAACCAGACA1850800.18867040920744219No Hit
GCTGCGGATATGGGTACGGCCCGGCG1353730.13799913175728912No Hit
TGACTTTTACTTCCTCTAGATAGTCA1089360.1110492743539114No Hit
ACCTTTAAGTTTCAGCTTTGCAACCA1011140.10307553358872545No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)