HL2YMBGX3_n01_tga1_30_k_r2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HL2YMBGX3_n01_tga1_30_k_r2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37869793
Sequences flagged as poor quality	0
Sequence length	75
%GC	76

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	5475927	14.459880992747967	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3235772	8.544467090168673	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA	1064341	2.810527641384256	TruSeq Adapter, Index 16 (97% over 40bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA	68088	0.17979501498727496	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	44890	0.11853774854275016	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1226000	67.80089	1
TATGCCG	126710	66.162674	48
CGTATGC	126780	66.12342	46
CTCGTAT	125795	66.05707	44
GTATGCC	127110	65.96261	47
GTCCCGA	121640	65.92716	36
GCCGTCT	127345	65.7833	51
CACCCGT	122990	65.756065	31
TCGTATG	127370	65.73859	45
CCGTCCC	122085	65.638824	34
CCCGTCC	122415	65.628136	33
CGTCCCG	122065	65.59023	35
TCACCCG	123520	65.54653	30
TCCCGAT	122335	65.51597	37
ATGCCGT	127965	65.513794	49
ACCCGTC	123590	65.44241	32
AGTCACC	125790	65.42772	28
CAGTCAC	128835	65.311165	27
TCTCGTA	127120	65.29247	43
CCGTCTT	128730	65.06214	52