[2024-07-31 16:06:41,712] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-07-31 16:06:41,712] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-07-31 16:06:41,713] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-07-31 16:06:41,715] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-07-31 16:06:41,715] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-07-31 16:06:41,716] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-07-31 16:06:41,753] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-07-31 16:06:41,753] multiqc [INFO ] This is MultiQC v1.9 [2024-07-31 16:06:41,753] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-07-31 16:06:41,753] multiqc [DEBUG ] Working dir : /vast/gencore/GENEFLOW/work/e2/4bc2a2283f43d51a23c1f1f9f38f9f/merged [2024-07-31 16:06:41,753] multiqc [INFO ] Template : default [2024-07-31 16:06:41,754] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-07-31 16:06:41,754] multiqc [INFO ] Searching : /vast/gencore/GENEFLOW/work/e2/4bc2a2283f43d51a23c1f1f9f38f9f/merged [2024-07-31 16:06:41,754] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-07-31 16:06:41,754] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-49207349/tmpqs5pg7xt [2024-07-31 16:06:41,894] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_49_fastqc.html [2024-07-31 16:06:41,904] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_49_fastqc.html [2024-07-31 16:06:41,974] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_50_fastqc.html [2024-07-31 16:06:41,981] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_50_fastqc.html [2024-07-31 16:06:42,048] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_51_fastqc.html [2024-07-31 16:06:42,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_51_fastqc.html [2024-07-31 16:06:42,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_52_fastqc.html [2024-07-31 16:06:42,129] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_52_fastqc.html [2024-07-31 16:06:42,204] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_53_fastqc.html [2024-07-31 16:06:42,212] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_53_fastqc.html [2024-07-31 16:06:42,306] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_54_fastqc.html [2024-07-31 16:06:42,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_54_fastqc.html [2024-07-31 16:06:42,452] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_55_fastqc.html [2024-07-31 16:06:42,469] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_55_fastqc.html [2024-07-31 16:06:42,563] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_56_fastqc.html [2024-07-31 16:06:42,570] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_56_fastqc.html [2024-07-31 16:06:42,636] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_57_fastqc.html [2024-07-31 16:06:42,643] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_57_fastqc.html [2024-07-31 16:06:42,731] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_58_fastqc.html [2024-07-31 16:06:42,744] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_58_fastqc.html [2024-07-31 16:06:42,813] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_59_fastqc.html [2024-07-31 16:06:42,822] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_59_fastqc.html [2024-07-31 16:06:42,894] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_60_fastqc.html [2024-07-31 16:06:42,901] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_60_fastqc.html [2024-07-31 16:06:42,966] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_61_fastqc.html [2024-07-31 16:06:42,972] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_61_fastqc.html [2024-07-31 16:06:43,045] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_62_fastqc.html [2024-07-31 16:06:43,055] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_62_fastqc.html [2024-07-31 16:06:43,140] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_63_fastqc.html [2024-07-31 16:06:43,153] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_63_fastqc.html [2024-07-31 16:06:43,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_64_fastqc.html [2024-07-31 16:06:43,248] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_64_fastqc.html [2024-07-31 16:06:43,335] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_65_fastqc.html [2024-07-31 16:06:43,347] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_65_fastqc.html [2024-07-31 16:06:43,448] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_66_fastqc.html [2024-07-31 16:06:43,460] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_66_fastqc.html [2024-07-31 16:06:43,541] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_67_fastqc.html [2024-07-31 16:06:43,548] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_67_fastqc.html [2024-07-31 16:06:43,614] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_68_fastqc.html [2024-07-31 16:06:43,621] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_68_fastqc.html [2024-07-31 16:06:43,691] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_69_fastqc.html [2024-07-31 16:06:43,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_69_fastqc.html [2024-07-31 16:06:43,772] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_70_fastqc.html [2024-07-31 16:06:43,781] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_70_fastqc.html [2024-07-31 16:06:43,849] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_71_fastqc.html [2024-07-31 16:06:43,856] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_71_fastqc.html [2024-07-31 16:06:43,933] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_72_fastqc.html [2024-07-31 16:06:43,945] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_72_fastqc.html [2024-07-31 16:06:44,019] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_73_fastqc.html [2024-07-31 16:06:44,026] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_73_fastqc.html [2024-07-31 16:06:44,104] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_74_fastqc.html [2024-07-31 16:06:44,115] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_74_fastqc.html [2024-07-31 16:06:44,197] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_75_fastqc.html [2024-07-31 16:06:44,203] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_75_fastqc.html [2024-07-31 16:06:44,270] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_76_fastqc.html [2024-07-31 16:06:44,276] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_76_fastqc.html [2024-07-31 16:06:44,346] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_77_fastqc.html [2024-07-31 16:06:44,353] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_77_fastqc.html [2024-07-31 16:06:44,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_78_fastqc.html [2024-07-31 16:06:44,433] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_78_fastqc.html [2024-07-31 16:06:44,502] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_79_fastqc.html [2024-07-31 16:06:44,512] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_79_fastqc.html [2024-07-31 16:06:44,586] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_80_fastqc.html [2024-07-31 16:06:44,594] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_80_fastqc.html [2024-07-31 16:06:44,666] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_81_fastqc.html [2024-07-31 16:06:44,673] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_81_fastqc.html [2024-07-31 16:06:44,743] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_82_fastqc.html [2024-07-31 16:06:44,753] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_82_fastqc.html [2024-07-31 16:06:44,829] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_83_fastqc.html [2024-07-31 16:06:44,843] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_83_fastqc.html [2024-07-31 16:06:44,920] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_84_fastqc.html [2024-07-31 16:06:44,930] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_84_fastqc.html [2024-07-31 16:06:45,014] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_85_fastqc.html [2024-07-31 16:06:45,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_85_fastqc.html [2024-07-31 16:06:45,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_86_fastqc.html [2024-07-31 16:06:45,112] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_86_fastqc.html [2024-07-31 16:06:45,183] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_87_fastqc.html [2024-07-31 16:06:45,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_87_fastqc.html [2024-07-31 16:06:45,260] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_88_fastqc.html [2024-07-31 16:06:45,268] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_88_fastqc.html [2024-07-31 16:06:45,339] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_89_fastqc.html [2024-07-31 16:06:45,347] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_89_fastqc.html [2024-07-31 16:06:45,416] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_90_fastqc.html [2024-07-31 16:06:45,422] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_90_fastqc.html [2024-07-31 16:06:45,491] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_91_fastqc.html [2024-07-31 16:06:45,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_91_fastqc.html [2024-07-31 16:06:45,573] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_92_fastqc.html [2024-07-31 16:06:45,581] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_92_fastqc.html [2024-07-31 16:06:45,648] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_93_fastqc.html [2024-07-31 16:06:45,654] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_93_fastqc.html [2024-07-31 16:06:45,725] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_94_fastqc.html [2024-07-31 16:06:45,733] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_94_fastqc.html [2024-07-31 16:06:45,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_95_fastqc.html [2024-07-31 16:06:45,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_95_fastqc.html [2024-07-31 16:06:45,871] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_96_fastqc.html [2024-07-31 16:06:45,876] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_CG_96_fastqc.html [2024-07-31 16:06:45,947] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n01_undetermined_fastqc.html [2024-07-31 16:06:45,954] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n01_undetermined_fastqc.html [2024-07-31 16:06:46,024] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_49_fastqc.html [2024-07-31 16:06:46,032] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_49_fastqc.html [2024-07-31 16:06:46,106] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_50_fastqc.html [2024-07-31 16:06:46,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_50_fastqc.html [2024-07-31 16:06:46,182] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_51_fastqc.html [2024-07-31 16:06:46,192] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_51_fastqc.html [2024-07-31 16:06:46,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_52_fastqc.html [2024-07-31 16:06:46,267] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_52_fastqc.html [2024-07-31 16:06:46,334] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_53_fastqc.html [2024-07-31 16:06:46,341] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_53_fastqc.html [2024-07-31 16:06:46,414] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_54_fastqc.html [2024-07-31 16:06:46,424] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_54_fastqc.html [2024-07-31 16:06:46,504] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_55_fastqc.html [2024-07-31 16:06:46,511] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_55_fastqc.html [2024-07-31 16:06:46,584] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_56_fastqc.html [2024-07-31 16:06:46,593] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_56_fastqc.html [2024-07-31 16:06:46,668] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_57_fastqc.html [2024-07-31 16:06:46,677] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_57_fastqc.html [2024-07-31 16:06:46,757] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_58_fastqc.html [2024-07-31 16:06:46,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_58_fastqc.html [2024-07-31 16:06:46,832] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_59_fastqc.html [2024-07-31 16:06:46,841] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_59_fastqc.html [2024-07-31 16:06:46,911] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_60_fastqc.html [2024-07-31 16:06:46,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_60_fastqc.html [2024-07-31 16:06:46,987] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_61_fastqc.html [2024-07-31 16:06:46,993] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_61_fastqc.html [2024-07-31 16:06:47,058] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_62_fastqc.html [2024-07-31 16:06:47,064] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_62_fastqc.html [2024-07-31 16:06:47,135] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_63_fastqc.html [2024-07-31 16:06:47,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_63_fastqc.html [2024-07-31 16:06:47,215] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_64_fastqc.html [2024-07-31 16:06:47,221] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_64_fastqc.html [2024-07-31 16:06:47,285] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_65_fastqc.html [2024-07-31 16:06:47,290] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_65_fastqc.html [2024-07-31 16:06:47,359] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_66_fastqc.html [2024-07-31 16:06:47,366] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_66_fastqc.html [2024-07-31 16:06:47,433] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_67_fastqc.html [2024-07-31 16:06:47,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_67_fastqc.html [2024-07-31 16:06:47,515] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_68_fastqc.html [2024-07-31 16:06:47,524] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_68_fastqc.html [2024-07-31 16:06:47,593] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_69_fastqc.html [2024-07-31 16:06:47,601] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_69_fastqc.html [2024-07-31 16:06:47,668] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_70_fastqc.html [2024-07-31 16:06:47,675] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_70_fastqc.html [2024-07-31 16:06:47,748] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_71_fastqc.html [2024-07-31 16:06:47,756] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_71_fastqc.html [2024-07-31 16:06:47,843] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_72_fastqc.html [2024-07-31 16:06:47,855] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_72_fastqc.html [2024-07-31 16:06:47,951] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_73_fastqc.html [2024-07-31 16:06:47,958] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_73_fastqc.html [2024-07-31 16:06:48,032] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_74_fastqc.html [2024-07-31 16:06:48,040] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_74_fastqc.html [2024-07-31 16:06:48,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_75_fastqc.html [2024-07-31 16:06:48,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_75_fastqc.html [2024-07-31 16:06:48,184] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_76_fastqc.html [2024-07-31 16:06:48,191] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_76_fastqc.html [2024-07-31 16:06:48,261] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_77_fastqc.html [2024-07-31 16:06:48,269] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_77_fastqc.html [2024-07-31 16:06:48,338] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_78_fastqc.html [2024-07-31 16:06:48,345] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_78_fastqc.html [2024-07-31 16:06:48,412] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_79_fastqc.html [2024-07-31 16:06:48,418] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_79_fastqc.html [2024-07-31 16:06:48,490] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_80_fastqc.html [2024-07-31 16:06:48,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_80_fastqc.html [2024-07-31 16:06:48,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_81_fastqc.html [2024-07-31 16:06:48,576] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_81_fastqc.html [2024-07-31 16:06:48,647] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_82_fastqc.html [2024-07-31 16:06:48,654] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_82_fastqc.html [2024-07-31 16:06:48,722] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_83_fastqc.html [2024-07-31 16:06:48,728] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_83_fastqc.html [2024-07-31 16:06:48,814] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_84_fastqc.html [2024-07-31 16:06:48,822] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_84_fastqc.html [2024-07-31 16:06:48,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_85_fastqc.html [2024-07-31 16:06:48,903] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_85_fastqc.html [2024-07-31 16:06:48,976] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_86_fastqc.html [2024-07-31 16:06:48,983] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_86_fastqc.html [2024-07-31 16:06:49,066] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_87_fastqc.html [2024-07-31 16:06:49,077] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_87_fastqc.html [2024-07-31 16:06:49,164] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_88_fastqc.html [2024-07-31 16:06:49,172] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_88_fastqc.html [2024-07-31 16:06:49,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_89_fastqc.html [2024-07-31 16:06:49,247] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_89_fastqc.html [2024-07-31 16:06:49,315] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_90_fastqc.html [2024-07-31 16:06:49,322] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_90_fastqc.html [2024-07-31 16:06:49,391] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_91_fastqc.html [2024-07-31 16:06:49,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_91_fastqc.html [2024-07-31 16:06:49,467] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_92_fastqc.html [2024-07-31 16:06:49,475] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_92_fastqc.html [2024-07-31 16:06:49,543] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_93_fastqc.html [2024-07-31 16:06:49,549] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_93_fastqc.html [2024-07-31 16:06:49,619] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_94_fastqc.html [2024-07-31 16:06:49,626] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_94_fastqc.html [2024-07-31 16:06:49,699] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_95_fastqc.html [2024-07-31 16:06:49,706] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_95_fastqc.html [2024-07-31 16:06:49,776] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_96_fastqc.html [2024-07-31 16:06:49,784] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_CG_96_fastqc.html [2024-07-31 16:06:49,858] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKVNYDSXC_n02_undetermined_fastqc.html [2024-07-31 16:06:49,866] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKVNYDSXC_n02_undetermined_fastqc.html [2024-07-31 16:06:50,405] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-07-31 16:06:50,407] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-07-31 16:06:50,440] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 49 samples (table) [2024-07-31 16:06:50,441] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-07-31 16:06:50,451] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-07-31 16:06:50,456] multiqc [DEBUG ] No samples found: conpair [2024-07-31 16:06:50,462] multiqc [DEBUG ] No samples found: peddy [2024-07-31 16:06:50,467] multiqc [DEBUG ] No samples found: somalier [2024-07-31 16:06:50,472] multiqc [DEBUG ] No samples found: methylQA [2024-07-31 16:06:50,481] multiqc [DEBUG ] No samples found: mosdepth [2024-07-31 16:06:50,486] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-07-31 16:06:50,490] multiqc [DEBUG ] No samples found: qualimap [2024-07-31 16:06:50,495] multiqc [DEBUG ] No samples found: preseq [2024-07-31 16:06:50,500] multiqc [DEBUG ] No samples found: quast [2024-07-31 16:06:50,505] multiqc [DEBUG ] No samples found: qorts [2024-07-31 16:06:50,510] multiqc [DEBUG ] No samples found: rna_seqc [2024-07-31 16:06:50,515] multiqc [DEBUG ] No samples found: rockhopper [2024-07-31 16:06:50,520] multiqc [DEBUG ] No samples found: rsem [2024-07-31 16:06:50,532] multiqc [DEBUG ] No samples found: rseqc [2024-07-31 16:06:50,537] multiqc [DEBUG ] No samples found: busco [2024-07-31 16:06:50,542] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-07-31 16:06:50,547] multiqc [DEBUG ] No samples found: disambiguate [2024-07-31 16:06:50,552] multiqc [DEBUG ] No samples found: supernova [2024-07-31 16:06:50,568] multiqc [DEBUG ] No samples found: deeptools [2024-07-31 16:06:50,578] multiqc [DEBUG ] No samples found: sargasso [2024-07-31 16:06:50,586] multiqc [DEBUG ] No samples found: verifybamid [2024-07-31 16:06:50,591] multiqc [DEBUG ] No samples found: mirtrace [2024-07-31 16:06:50,596] multiqc [DEBUG ] No samples found: happy [2024-07-31 16:06:50,601] multiqc [DEBUG ] No samples found: mirtop [2024-07-31 16:06:50,608] multiqc [DEBUG ] No samples found: homer [2024-07-31 16:06:50,614] multiqc [DEBUG ] No samples found: macs2 [2024-07-31 16:06:50,619] multiqc [DEBUG ] No samples found: theta2 [2024-07-31 16:06:50,625] multiqc [DEBUG ] No samples found: snpeff [2024-07-31 16:06:50,632] multiqc [DEBUG ] No samples found: gatk [2024-07-31 16:06:50,637] multiqc [DEBUG ] No samples found: htseq [2024-07-31 16:06:50,643] multiqc [DEBUG ] No samples found: bcftools [2024-07-31 16:06:50,648] multiqc [DEBUG ] No samples found: featureCounts [2024-07-31 16:06:50,656] multiqc [DEBUG ] No samples found: fgbio [2024-07-31 16:06:50,671] multiqc [DEBUG ] No samples found: dragen [2024-07-31 16:06:50,676] multiqc [DEBUG ] No samples found: dedup [2024-07-31 16:06:50,682] multiqc [DEBUG ] No samples found: damageprofiler [2024-07-31 16:06:50,707] multiqc [DEBUG ] No samples found: biobambam2 [2024-07-31 16:06:50,712] multiqc [DEBUG ] No samples found: mtnucratio [2024-07-31 16:06:50,714] multiqc [DEBUG ] No samples found: picard [2024-07-31 16:06:50,719] multiqc [DEBUG ] No samples found: prokka [2024-07-31 16:06:50,724] multiqc [DEBUG ] No samples found: samblaster [2024-07-31 16:06:50,736] multiqc [DEBUG ] No samples found: samtools [2024-07-31 16:06:50,741] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-07-31 16:06:50,746] multiqc [DEBUG ] No samples found: bamtools [2024-07-31 16:06:50,751] multiqc [DEBUG ] No samples found: jellyfish [2024-07-31 16:06:50,760] multiqc [DEBUG ] No samples found: vcftools [2024-07-31 16:06:50,765] multiqc [DEBUG ] No samples found: longranger [2024-07-31 16:06:50,770] multiqc [DEBUG ] No samples found: stacks [2024-07-31 16:06:50,775] multiqc [DEBUG ] No samples found: varscan2 [2024-07-31 16:06:50,790] multiqc [DEBUG ] No samples found: bbmap [2024-07-31 16:06:50,796] multiqc [DEBUG ] No samples found: bismark [2024-07-31 16:06:50,802] multiqc [DEBUG ] No samples found: biscuit [2024-07-31 16:06:50,807] multiqc [DEBUG ] No samples found: hicexplorer [2024-07-31 16:06:50,812] multiqc [DEBUG ] No samples found: hicup [2024-07-31 16:06:50,817] multiqc [DEBUG ] No samples found: hicpro [2024-07-31 16:06:50,821] multiqc [DEBUG ] No samples found: salmon [2024-07-31 16:06:50,826] multiqc [DEBUG ] No samples found: kallisto [2024-07-31 16:06:50,832] multiqc [DEBUG ] No samples found: slamdunk [2024-07-31 16:06:50,838] multiqc [DEBUG ] No samples found: star [2024-07-31 16:06:50,843] multiqc [DEBUG ] No samples found: hisat2 [2024-07-31 16:06:50,848] multiqc [DEBUG ] No samples found: tophat [2024-07-31 16:06:50,854] multiqc [DEBUG ] No samples found: bowtie2 [2024-07-31 16:06:50,859] multiqc [DEBUG ] No samples found: bowtie1 [2024-07-31 16:06:50,864] multiqc [DEBUG ] No samples found: snpsplit [2024-07-31 16:06:50,868] multiqc [DEBUG ] No samples found: kat [2024-07-31 16:06:50,875] multiqc [DEBUG ] No samples found: leehom [2024-07-31 16:06:50,880] multiqc [DEBUG ] No samples found: adapterRemoval [2024-07-31 16:06:50,885] multiqc [DEBUG ] No samples found: clipandmerge [2024-07-31 16:06:50,890] multiqc [DEBUG ] No samples found: cutadapt [2024-07-31 16:06:50,895] multiqc [DEBUG ] No samples found: flexbar [2024-07-31 16:06:50,901] multiqc [DEBUG ] No samples found: kaiju [2024-07-31 16:06:50,906] multiqc [DEBUG ] No samples found: kraken [2024-07-31 16:06:50,911] multiqc [DEBUG ] No samples found: malt [2024-07-31 16:06:50,916] multiqc [DEBUG ] No samples found: trimmomatic [2024-07-31 16:06:50,922] multiqc [DEBUG ] No samples found: sickle [2024-07-31 16:06:50,927] multiqc [DEBUG ] No samples found: skewer [2024-07-31 16:06:50,932] multiqc [DEBUG ] No samples found: sortmerna [2024-07-31 16:06:50,936] multiqc [DEBUG ] No samples found: biobloomtools [2024-07-31 16:06:50,941] multiqc [DEBUG ] No samples found: fastq_screen [2024-07-31 16:06:50,946] multiqc [DEBUG ] No samples found: afterqc [2024-07-31 16:06:50,951] multiqc [DEBUG ] No samples found: fastp [2024-07-31 16:07:04,311] multiqc.modules.fastqc.fastqc [INFO ] Found 98 reports [2024-07-31 16:07:05,155] multiqc [DEBUG ] No samples found: pycoqc [2024-07-31 16:07:05,160] multiqc [DEBUG ] No samples found: minionqc [2024-07-31 16:07:05,165] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-07-31 16:07:05,172] multiqc [DEBUG ] No samples found: clusterflow [2024-07-31 16:07:05,177] multiqc [DEBUG ] No samples found: bcl2fastq [2024-07-31 16:07:05,182] multiqc [DEBUG ] No samples found: interop [2024-07-31 16:07:05,187] multiqc [DEBUG ] No samples found: ivar [2024-07-31 16:07:05,192] multiqc [DEBUG ] No samples found: flash [2024-07-31 16:07:05,197] multiqc [DEBUG ] No samples found: seqyclean [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-07-31 16:07:05,197] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-07-31 16:07:05,198] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-07-31 16:07:05,311] multiqc [INFO ] Compressing plot data [2024-07-31 16:07:07,031] multiqc [INFO ] Report : multiqc_report.html [2024-07-31 16:07:07,031] multiqc [INFO ] Data : multiqc_data [2024-07-31 16:07:07,032] multiqc [DEBUG ] Moving data file from '/state/partition1/job-49207349/tmpqs5pg7xt/multiqc_data' to '/vast/gencore/GENEFLOW/work/e2/4bc2a2283f43d51a23c1f1f9f38f9f/merged/multiqc_data' [2024-07-31 16:07:07,247] multiqc [INFO ] MultiQC complete