Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HKVNYDRXX_l02_n01_Emily_2_18 fail 0.0 pass 151.0 Sanger / Illumina 1.9 warn pass pass 151.0 Conventional base calls pass warn 10552708.0 pass pass pass 41.0 94.9454597239 HKVNYDRXX_l02_n01_Emily_2_18.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_8 fail 0.0 pass 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 8378330.0 pass pass pass 41.0 95.4747651715 HKVNYDRXX_l02_n01_Emily_2_8.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_1 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 15212741.0 pass warn warn 55.0 39.0257064094 HKVNYDRXX_l02_n01_Emily_2_Mar_1.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_11 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 10598291.0 pass warn warn 55.0 40.2853418298 HKVNYDRXX_l02_n01_Emily_2_Mar_11.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_12 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 18270746.0 pass warn warn 55.0 38.4680209464 HKVNYDRXX_l02_n01_Emily_2_Mar_12.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_13 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 14219543.0 pass warn warn 57.0 27.7441380259 HKVNYDRXX_l02_n01_Emily_2_Mar_13.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_14 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 11132136.0 pass warn warn 55.0 43.1809305165 HKVNYDRXX_l02_n01_Emily_2_Mar_14.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_15 warn 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 13437991.0 pass fail warn 52.0 56.9089290135 HKVNYDRXX_l02_n01_Emily_2_Mar_15.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_16 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 14013946.0 pass warn warn 55.0 38.3792621928 HKVNYDRXX_l02_n01_Emily_2_Mar_16.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_17 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 17732085.0 pass fail pass 52.0 52.7459657767 HKVNYDRXX_l02_n01_Emily_2_Mar_17.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_18 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 13062414.0 pass warn warn 54.0 48.648077789 HKVNYDRXX_l02_n01_Emily_2_Mar_18.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_19 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 28819817.0 pass warn warn 56.0 30.1984749488 HKVNYDRXX_l02_n01_Emily_2_Mar_19.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_2 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 12714229.0 pass warn warn 54.0 46.1618999563 HKVNYDRXX_l02_n01_Emily_2_Mar_2.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_20 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 21537017.0 pass warn warn 55.0 37.6999163186 HKVNYDRXX_l02_n01_Emily_2_Mar_20.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_21 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 21141774.0 pass warn warn 55.0 43.9151234225 HKVNYDRXX_l02_n01_Emily_2_Mar_21.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_22 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 20998132.0 pass warn warn 53.0 42.8973715649 HKVNYDRXX_l02_n01_Emily_2_Mar_22.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_3 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 9079495.0 pass fail pass 53.0 58.2384619833 HKVNYDRXX_l02_n01_Emily_2_Mar_3.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_4 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 17298510.0 pass fail warn 53.0 49.6837569358 HKVNYDRXX_l02_n01_Emily_2_Mar_4.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_5 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 11584586.0 pass warn warn 54.0 51.6983582394 HKVNYDRXX_l02_n01_Emily_2_Mar_5.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_6 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 8934785.0 pass fail pass 52.0 62.0874450224 HKVNYDRXX_l02_n01_Emily_2_Mar_6.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_7 warn 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 23859083.0 pass fail pass 51.0 52.6852045996 HKVNYDRXX_l02_n01_Emily_2_Mar_7.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_8 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 28854586.0 pass warn warn 57.0 26.2926366514 HKVNYDRXX_l02_n01_Emily_2_Mar_8.fastq.gz pass pass HKVNYDRXX_l02_n01_Emily_2_Mar_9 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 20046944.0 pass fail warn 53.0 49.639528344 HKVNYDRXX_l02_n01_Emily_2_Mar_9.fastq.gz pass pass HKVNYDRXX_l02_n01_undetermined pass 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 15714813.0 pass warn pass 45.0 45.4384802151 HKVNYDRXX_l02_n01_undetermined.fastq.gz pass pass HKVNYDRXX_l02_n02_Emily_2_18 fail 0.0 pass 151.0 Sanger / Illumina 1.9 warn pass pass 151.0 Conventional base calls pass warn 10552708.0 pass pass pass 41.0 95.1367121543 HKVNYDRXX_l02_n02_Emily_2_18.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_8 fail 0.0 pass 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 8378330.0 pass pass pass 41.0 95.6952238408 HKVNYDRXX_l02_n02_Emily_2_8.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_1 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 15212741.0 pass warn warn 55.0 44.5559172212 HKVNYDRXX_l02_n02_Emily_2_Mar_1.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_11 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 10598291.0 pass warn warn 55.0 44.0586640791 HKVNYDRXX_l02_n02_Emily_2_Mar_11.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_12 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 18270746.0 pass warn warn 55.0 41.1041612562 HKVNYDRXX_l02_n02_Emily_2_Mar_12.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_13 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 14219543.0 pass warn warn 57.0 32.4221228264 HKVNYDRXX_l02_n02_Emily_2_Mar_13.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_14 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 11132136.0 pass warn warn 55.0 46.6888816854 HKVNYDRXX_l02_n02_Emily_2_Mar_14.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_15 warn 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 13437991.0 pass fail warn 52.0 60.4775564465 HKVNYDRXX_l02_n02_Emily_2_Mar_15.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_16 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 14013946.0 pass warn warn 55.0 42.2965691555 HKVNYDRXX_l02_n02_Emily_2_Mar_16.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_17 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 17732085.0 pass fail warn 52.0 56.7511265954 HKVNYDRXX_l02_n02_Emily_2_Mar_17.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_18 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 13062414.0 pass fail warn 54.0 51.9224180667 HKVNYDRXX_l02_n02_Emily_2_Mar_18.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_19 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 28819817.0 pass warn warn 56.0 33.2852247498 HKVNYDRXX_l02_n02_Emily_2_Mar_19.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_2 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 12714229.0 pass warn warn 54.0 50.1848909617 HKVNYDRXX_l02_n02_Emily_2_Mar_2.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_20 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 21537017.0 pass warn warn 55.0 41.6061701858 HKVNYDRXX_l02_n02_Emily_2_Mar_20.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_21 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 21141774.0 pass warn warn 55.0 46.3258983963 HKVNYDRXX_l02_n02_Emily_2_Mar_21.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_22 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 20998132.0 pass fail warn 54.0 46.1133068725 HKVNYDRXX_l02_n02_Emily_2_Mar_22.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_3 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 9079495.0 pass fail pass 53.0 60.6183000831 HKVNYDRXX_l02_n02_Emily_2_Mar_3.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_4 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 17298510.0 pass fail warn 53.0 52.6419041453 HKVNYDRXX_l02_n02_Emily_2_Mar_4.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_5 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 11584586.0 pass warn warn 54.0 55.1851074975 HKVNYDRXX_l02_n02_Emily_2_Mar_5.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_6 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 8934785.0 pass fail pass 52.0 65.7090080903 HKVNYDRXX_l02_n02_Emily_2_Mar_6.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_7 warn 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 23859083.0 pass fail pass 51.0 56.1207647625 HKVNYDRXX_l02_n02_Emily_2_Mar_7.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_8 fail 0.0 fail 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 28854586.0 pass warn warn 57.0 30.2575298392 HKVNYDRXX_l02_n02_Emily_2_Mar_8.fastq.gz warn pass HKVNYDRXX_l02_n02_Emily_2_Mar_9 fail 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass warn 20046944.0 pass fail warn 54.0 53.3308079338 HKVNYDRXX_l02_n02_Emily_2_Mar_9.fastq.gz warn pass HKVNYDRXX_l02_n02_undetermined pass 0.0 warn 151.0 Sanger / Illumina 1.9 fail pass pass 151.0 Conventional base calls pass fail 15714813.0 pass warn warn 46.0 54.7468002429 HKVNYDRXX_l02_n02_undetermined.fastq.gz warn pass