FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAAGATGGCGCTGCCCTTTGCACGCTGTTGGAAGTCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGA12.857142857142857No Hit
GGACAAACGAGAGGTATAATCCTATTTGGCCTTCACTAAAACCGGATGGACAGAGAACTTTGTGTTCTTTATCTT12.857142857142857No Hit
GAGTGTGCCGCAGTGCAGCTACTTCATTCTGTTCTCACCAGAACCCTTGGACATAAGCGTTGTGAAGCTGTCTCT12.857142857142857No Hit
CCCACAGCTTTAGCACCACGGACAGCGGCAGGCGCATCTTGGGCTAAGAAGTGCCTGTGCTTAGGTGGCTGCCAG12.857142857142857No Hit
ACTCTCGACTAGTGTGTTTGGCGTTACCAGGGAGTCTGGAGACTGTCTCTTATACACATCTGACGCTGCCGACGA12.857142857142857No Hit
TCTGCGGGGCCTGCGCCCACCGCAACCCACAGGGACCTTGAACAGGCGTGCCCGAGGGAGGCGCTTGCACCTGTC12.857142857142857No Hit
AGCATGAGGAGCTGGTTGGAGTCTCCTTCTCTTTATCACAGCTCCAAATAAGGGAACCCTCAGAAGATCTGGGGG12.857142857142857No Hit
GGATTTCTGTTAGATACAGCGTGGGAGGGCTTTCCCCTTCAGCGGCTGGCAGCACACAGCCCCCCGCTTCTCCCT12.857142857142857No Hit
ACAGTGCCCTGCGCGGCGGGGCCGCCTGGGAGAATCCTGCCGAACCCGGAACAAAGCGCCCGCAGCCGCCGGGCA12.857142857142857No Hit
CCTGTTGGCTGAGGCTGGAACGGATGGCTGCTTTCAGAGACCCGCGAGAAGAGAAGTTCGCGGGATGGTCCAGCT12.857142857142857No Hit
AATTCCCCCTGTGGTACAAAGTCGACTAAAAAGTTCGGGGCGGGCGACCATTCTCGGGAAAGATAGACACAAAAC12.857142857142857No Hit
CTCCACCAGACCTCCCTTCTCCCTAGGGCCTCAAGTCTCTCTAGGGTTAGGTGCATCTTTGCTTGCTGATCTCCT12.857142857142857No Hit
GCTTACGACTTAACTTACTTTCTTTTTGGTGCTCCATGACAGAGCTGTAGAAGAGTGCTCTCCAGGGCCATTTGG12.857142857142857No Hit
GCCCCACTCCACCCGCTCCCGGCACTTCTCAGAAACGGGCAGGAGAAAGGCTGTCTCTTATACACATCTGACGCT12.857142857142857No Hit
GAGCATGTGTGTGTGTGTGTGTGTGTGTGTGCACATGTGAGCATGTCTTGGCACACCAGCAGAGGTCAGAGGGCT12.857142857142857No Hit
GGACGGAGCCCACCAGGTCACATTGGGAGCCAATGTCGCCTCGGTGGCCATGCTTCCCCACCTCCTGTCTCTTAT12.857142857142857No Hit
AACAAGAACCCCGCCTGTTTACCAAAATCATCACCTCTAGCACTGTCTCTTATACACATCTGACGCTGCCGACGA12.857142857142857No Hit
CCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGCTGTCTCTTATACACATCTGACGCTGCCGAC12.857142857142857No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAACACTCAGCAAGGTCCTTAGGAGATCA12.857142857142857No Hit
GGTTAAAGAAGCGCACCTCCTTGAGCACGACGTGACTATAGGAGCTGCAGGCTTCCTGAGCCAGGCCGAAGGGCC12.857142857142857No Hit
CCTTAGACCAAATTTGTGTAACTGCTATACAAACTATTTTTCAAGCTTCTATTTTGTTCGTGGTAACAACAGAGT12.857142857142857No Hit
GTTCTTGGCTGAGGGTATGCTGCTCTTGAAAGCGTGAAAACATGACAGGCAACAACAACCTAACTCCTCTCTCAC12.857142857142857No Hit
CAAGTAGACTCATACTTCTCACGCTGCACAAAATTCAACTCCAAATAGATGGAAGACCTCAACATAAAAGCACAT12.857142857142857No Hit
GTGCCCACCAGCGTTCTGCGCCGCGGGGCTTGGACACGGGCGCCCCCTTGCGGCCCCTCTCGGTCCCCGCATCGC12.857142857142857No Hit
GGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAA12.857142857142857No Hit
GGCTGCAGCATTTCAGGTCACTAGTAATGAAATAAAAACAGGAGAGCAACTTACAACGTCTCATGTCTTTTCTGG12.857142857142857No Hit
CTTCCCCACCTCCCAGTTCCAGCCAATACCGGCATCCAGGAACAAGGCCAGGGCCGCCCCCAGAGCCAAGGCTGC12.857142857142857No Hit
GAATGGGATGACTGTGAGTGATTTTCTGAGGCAGGGGGATGAATTCGAGTATAAAGATGAGACACTGCCTTCACT12.857142857142857No Hit
GGCTGAGGCCGCCTCCCAAGCCAGGCGGACACCTGTCCTCTGGTCCGGATGGTGGCCGGTTATCTGCGGCCCGCC12.857142857142857No Hit
GGTTATAGTACATTTGCCTATCGATTCTTTCCTTGTGATAGATTCAAGCTGTATCTTATTAACATCTCAAGCTCC12.857142857142857No Hit
GTTCTCTATGGAGTTGACTTCCAATGTCAACAGTCGATGATATTCTTTCTCTCCCCTTTCCTTCCAACTCCTGTC12.857142857142857No Hit
TGCTTAGGTGTGTGTACATAGTGGTTCTGGGGTTCAGAGAGGGGGCAGTAATGTGCACAGTTTTTTGAGGCTTCG12.857142857142857No Hit
CTCCCACTCCTCGGTCGCCTCTCACCCAACACAACAAACCCCAAAACCCAAAAAAACACCACCAAACACAAAAAA12.857142857142857No Hit
CCCCAAAGACAGTTCCAGGTCCACTGAGAATCCCAGTTTAGGATTTAACTCTGAACAAAGAAAATATTTTAAATG12.857142857142857No Hit
CTCTCACATACTGATGCCCGTCACTCCACTCTCATTTATCCATGTCTTCACGAGGTTGTAGGTCTGTCTATTATA12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers