FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr68.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr68.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length75
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACAGGGCTTCACTCCAAATTGCTACTATCAACAAATGCATTGATCTTAGCTCGTACATCTCTACAATGACGGT14.3478260869565215No Hit
CTTGAAAGATGAAAGTATTAAAGCCCAAATGCTGCACAGGCAGATAATCAGCATACTCTTATACACATCAGAAGC14.3478260869565215No Hit
CAGAAAAGCAGGTCCCTCACTCACAGACATACAACGTCCCCAGCCCTAACGAGTAGCAAACTGTCCCAACCCACA14.3478260869565215No Hit
GGTCTCAAGGCTGCAGGGGCCTGGCAGAGAGGAACTGACCATCACCTGTATCTTAGACACATCTGACGCTGCCGA14.3478260869565215No Hit
GAAAAAAACAGTACAAAGGGGGAGGGCCGGGACCGAGGGGGCGGGACGGTGAGAAACGGGAATCGAGCAAGCGCA14.3478260869565215No Hit
AACCAGGGGTTGGGAGAACCGGGTTGTGGAGAATGTGCGAGTGCGGGGGCGTAAGGGATGGTGGGGGAGGCAGGT14.3478260869565215No Hit
CTCCAGGACCGCCTCCTGGGCCCCGCGGACAAGCCCAGGCACAGACAACGGGGACTGCGCCCGGGACAGAGTTTT14.3478260869565215No Hit
GAAAATCCCGCATCCCAGAATCTCACACCTAATCACCACACACACCTCCGAGCCCTGAAAATTCAAACAAACTTA14.3478260869565215No Hit
CCACTACGCAGGGAGAAACAGCGACAGCAGCCCGGCAACTGGGTGCCCCGGCGAAGAGAATGATCACCGCCTCCA14.3478260869565215No Hit
GAGTAGCGGGGGTTTGGCTAAATAGTATTTAACTGTTCGCTAGTGTTCCCGTGGGTTAGTCAATCACAATCACTG14.3478260869565215No Hit
CCAAAGAACTCCCACCATCAGATTGAATGAGCCCAGCTGCACGCAGGAGCGGCTGCGCAGCCGGGGGGACCGCGG14.3478260869565215No Hit
CTTCACGGGACCCCAGATGAGGCCCGCACATGAAAGCTGGGAAGCCCTGGTCCTGTGTCTGTTAGTGGGGTGCGG14.3478260869565215No Hit
CACCCGCCCCACCTACTCCGGATAAGCCCGGAGGGGCACGGTGAGTCAGATCTCCGGCACCCGCGGTTCGGGCGA14.3478260869565215No Hit
CCGAAAGTTACCTTTGGCCCGGGCGACCACGCCAACAATCACTTCAGGGCCAAATAACTCCTCGACCCAGGAGGC14.3478260869565215No Hit
GGCGGGGGGAGGTGGCTGAAGGGACGCGCCGCTCGGTGAGCGCGCCGAGGAAGAGAGGCGAGCGGAGAGTGGAGG14.3478260869565215No Hit
CCTCAACGCCGCTAGCAGACGCTGTACGCTGAATGCCGCCAACGGAAGCACCACCCATAAAGGGAGGAGGACAGG14.3478260869565215No Hit
CTCAAAGCCTAACACATACCACACCTAAATGCGGTTATTAAAAACGTTATCATTAAGAAATATGAGTAATCATAA14.3478260869565215No Hit
GTCAAATCAAGATTAAGGGGCCATAGATTCGCTCAAGGTCTGCCAGGCTCGAAGATGGCATGTTTGCAAACTCTG14.3478260869565215No Hit
CTGTGGCGCATCACATTTTCCTGGATATGGAAAATGGAGGGTCCCTGGGAGAGAAACGAAGATCTGTCTCTTATA14.3478260869565215No Hit
CTATATTGATTCCCAACAACCAACCACACAATAAAAGCACCCGTATACAAAAAATCAACAACATAAACTAACGAA14.3478260869565215No Hit
CCTCAACAGCAACCCACTTCCGCTTCGGAGGCCTCGGCTCCGCCCCCCATCATGTCCCCATTGGCCGCCCGCCTA14.3478260869565215No Hit
GCGTGGCTGGAATTCGGTGTGTGAGTTGTGGGTACTGCACACTTTGATATGCCTAATCTACAAATCAGTGGCTCG14.3478260869565215No Hit
GGGGCGAGCCCCGCGGAATGCGGCGGGTCCTGAGCCCGACCACCGCTCACCTTTGTTCGCCTGCCCTTGCCGGGA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)