FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length75
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAGAAGAGGGCGAGGCGCTTAGCCAGGGCCATAGAGTGAAGTGGGCGGCGGCCGCGGCGGCCGGGGCGCCGG13.125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13.125No Hit
GTCTTTCTCCGGCCCCGGCCAGCGGAGACCTGGGATGGGGCAGGAGCCGGTGAGTGGGGAGTGCGGGGAGCCGAA13.125No Hit
GGAGGAGGGAGTGGGAGGGGGCGGTGCCTATGGCCCCCGAGCCGCGCGCACAGTGACGGCCACCGCGCGCGCCTG13.125No Hit
GGGTAGAGGCGTGTGCGCATAGTTGTTTGTTGGATGGTGGTGTATTTGGGGGAGGGGAGGGTTGGGGGTTGGTGG13.125No Hit
CCCCGAAGCCAACCATCCATCCACGCTACATCTATCACTTGCACACACACCACACAGATCTCTCCACCCCAAAGG13.125No Hit
GGCACCCCCCGCAAGACCCTGAGGCCAAAAACTTGCCCAGCGGACTGCCCGCACCCTGTCTCTTATACACATCTG13.125No Hit
CCATGGAGATGGGGGTAGGGATCGTGCACACTCAAGCCTTCAACTCCGCTTCTCCTCAAACAACCACAGGGTCTG13.125No Hit
GCCCAAAACAGACCCCCCGACGGATTGTCAATACCACAACCCGCCCCCGTGGGCCAAAAGCAGTGTTGTATACAC13.125No Hit
GGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13.125No Hit
CTACAACCAAACCACGTAGCCAAATCTCCCCGAACCCCTTAACCTCTATTAGCATATAGCATACTGTCTCGAAAA13.125No Hit
AAGTAAGGCGTAAAATCACCCTTTTCATTCGTATTCCCGATGATAAAAGGATGTCCCTGATGATTAAGATTAGCG13.125No Hit
CTATAAAGCGTCCCACTAGTTTGATACATAGACGGGTGTGCTCTTTTAGCTTGTCTTAGGCTGTGTGTTATACAG13.125No Hit
CCTAAAGTGAGCCCCCGATTTAGAGCTTGACGGTGAAAGCCTGCGAACGAGGCTAGAAAGGAAGGGAAGAAAGAG13.125No Hit
GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAAT13.125No Hit
CCTACACACTGCTTTAGGGAAGTGAAGATGTCCACTCCTCCCCATGCACCCCCTACCTCCAGTTCCATTGGCTCT13.125No Hit
GATTTGGTGCTGTGAAATTGTTTTAGGTAATAGCTTTTCTAGTCAGGTTAGGTCTAGGACTGTCTCTTATACACA13.125No Hit
ACTCCCGGGGGACGATGCGGTGGCCGCGCATGGGGCGCGGAGTGTTGGGTTTGTTTTATTCTGTGGGTGCTGGGG13.125No Hit
GGGTGGCGGCGGAGGAGCCGCGGCGGGGCCCGCTCTGCCGCGCCAGCGTCCGTGCGGGCGGCCGTGCTCCCTGAG13.125No Hit
GTCCGTGGGTTTGACGAAGCCGTCTGGATCACCAAGCGCACGCCGATCGTGACCGTTGGCGGGCGGGTAAAGTTC13.125No Hit
CAATACACTCATCTCACAACCGAAACCTATACCCTTCCCCCATCCCCACACCAAAGCACCCAGCCAACCACCCTC13.125No Hit
GTCCCCTCGACCAGTGACGACTCGCATGGTCGGCCTAGCCTCCGGCCTCTCCTATTCGCCCTTCATTGGCAGCCA13.125No Hit
GTTATATTCACCCATAGCATTGGCATCAACAGTTGAGTATGGTGAGACAGTTGATGGTGTTGTCCTGGACAAAGA13.125No Hit
CCCCCAACCCGCCACCAGACAGACATAGTACGTAGAAATCAGTTATAGCACTCAAAAATACAAAACTCACCATCC13.125No Hit
GGCCTGGCCATTCCCATTTCTTATATGAGTAGCAGTCTTTGTTCTACCATTGGCGAATGGAGAACAGTACAGACC13.125No Hit
GGGTTGCTTCCCTAATTCCATAGCGTGGTCTTTTTTCCCCTCTCTCTGACCTTCGCCACCCACCCGCTCCCTGGA13.125No Hit
AAACAAATCATTTATTAACTCAGCAGAAAAAGATGTCGCTCACGTTAGGGACCTGCTAGCTGAAATTCCAATTAA13.125No Hit
GACTAGAGCCGTCCCAGATGTACCAGAATCTAGCAATCCCTCAACCACCTCACTCCACACCAGCCCTGTCACCTA13.125No Hit
ATCGTGCTGTTATCAGCACTGGTTTCATGCGCCCTGATTTCAGGCTGTAATGAAGAAAATAAATCTAATGTATCC13.125No Hit
GGCTTACAGGGGCGCCGATCTTCGCTGGCGCTAGGCGCTTGGTTTCCTCTCCGCAGCTCCTGTCTCTTATACACA13.125No Hit
GCACTAGGCCGGAGTGCGTGGAGAACAAACACAGTCCAATCATGAGCGACAGAGGCTAGTCCAACAGACACACGT13.125No Hit
GGCACACGCTCGCGCCTCGCCGCTCCGCCGCCGCCGCCTTAACCGCGCACGAACGCCCCTCTCTGGTAGACACAT13.125No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)