FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr57.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr57.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGCTGTCGCTTATACACATCT13.125No Hit
GTCCTCAACTGCACACCAAGCTTGTGTGATTAATACCACCCACGCCTGTCTCTTATACACATCTGACGCTGCCGA13.125No Hit
GCCAATACTCCACCGTTCTGAAACAAACTTCAGTAGGCATCAAACTCAACCTACTAAAATACACTCATTGCTGTT13.125No Hit
GGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCT13.125No Hit
GCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGCTGTCTCTTATACACATCT13.125No Hit
GTTTTTGGAAGCACAGCATTATGAATGAAAAAAACTACACAGAAAAGTTCCCATTAAAAAATGTCTATTAAACAC13.125No Hit
GGCTGGACGCGAGCGGAAAAAAATGATGCCAATGATACCCGCGCTATCATTCAACGTCTGGTGGAGATCCGTGCC13.125No Hit
GCTGGAGGCATCACACTACATGACTTCAAACTATACTACAAGGCTACACTAACCAAAACAGCATGTTCCTCGTAC13.125No Hit
CTGTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACTTA13.125No Hit
CAATAAGTGTCACCAGATCCCATACTTAGAGTTATGCGCACACAATCATCTCGCAAACAGTTCCAATCTTAGTCA13.125No Hit
GTGAAGCGGAGAAAGTGTTTTGCTTTATACTTCCGCGAATTGCATCTCTTATTAAGAATAAACTGGGCACACCAC13.125No Hit
CTACTCAACAGACGCAACAACCCACTAAAAAAAACAACCCCAAATCACTCGATACGTAAAGTATGGCATAAAAAT13.125No Hit
AACAATGACATTGATTATTCCCTAAGGCCGTCATCTCTAGCCCTGTCTCTTATACACATCTGACGCTGCCGACGA13.125No Hit
GGTCGGCACATGCCCCGTGCCAGCCGACTCCCCAACCCTCCGGTCAGCCGCGCTATTGGTCCTGACCTCCCCCCT13.125No Hit
CGGCTGCGGGGAGGTGGCTGGTGCAGACGAAGGTGCCCGGCCTGTCTCTTATACACATCTGACGCTGCCGACGAG13.125No Hit
CGCATCACTAGTACAGTAATATGGGTAAAGTCTTCTTCATGCAAACCGGCAGGTTCTCGGGTCTGACTCTTATAA13.125No Hit
GGCGGGGCGTGGGCGGGCGGGGGGGGGGGCGGGTGGGGCGGTCCAGGGGGTGGGTGGGGCCGGTGTGGGGGGGTC13.125No Hit
CCCTGAATCTCATTGAGAAGCGAACGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACC13.125No Hit
GTATATGATCCAGATGCACCTACAGGCAGTGGTTGGTGGCATTGGACCTGTCTCTTATACACATCTGACGCTGCC13.125No Hit
GATATGATGAAAAACAATAAAAAGGACTAACATCACTTAAGTTCACACTCCAAAACATAATAACAGATATCTATT13.125No Hit
ACCTAAAACAAAAGCATAAAAACTAAAGAAACCTCAAAAAGGACTAAACAAATCACACCCTAAAGCCAATCTATA13.125No Hit
GCTCAGGACCCCGGCTGCACCGCGCTGGCCCGGGACGGGCGGGGGCAGGGGGTGGCGGGGCCCGAGCGATACAGC13.125No Hit
GCTCTATTCTCCTTGTCTGCTGCCATGTGAGACATGCCGTTCACCATCCACCATGATTGTGAGGCCTCCCCAGCC13.125No Hit
AGGCTGGACTGCTCGCCCTGCAGGGCTGGCTGAGCTCTCCCCCACTGCTCACTTCCTCTCACTTATACACATCTA13.125No Hit
CTTCTGGGCAGCCCAAGCTGAAACAGATCCCCATACCTGGAGCCTGCTGCAGCCAGGACTGATATGCAGGAACCC13.125No Hit
CACACAAACAAAGTTAACCTAGAATATCCTCATACGCAACACAAGATACTATGAAAGAACAAGAAAAAATATACA13.125No Hit
CCATAAACAACAAGGCAAATCCTTACTAATCGAATAAACACATAAACAACAAACATGGCACTCACATGAAAAACA13.125No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATATCCCACAAAGAGGACACCAACTCTCTCTAATAC13.125No Hit
GTTGGGACAAGGTCTTTTAAACAAGCCCTGGGGCTTTGTCACAAATGTTGCATTTTATCCTTTATTCGGACTTAA13.125No Hit
GCGCCATCCGGCCCAAACCAGTGGGGATCGATAGCGGTAGGTTTACCCTGTGCCTGTCTCTTATACACAGCTGAC13.125No Hit
GTAAACAGCCTCAATCCATTTGCACTATTGATTTCTCACACACTGCAGTAGGCCTGTCTCTTATACACATCTGAC13.125No Hit
GACCGTGGGGCACTGCCTCGCTTTGGGACAACTCGGGGCCGCATCTGTCTCTTATACACATCTGACGCTGCCGAC13.125No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)