FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr56.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr56.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length75
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTAGCCCCCCCCCCGCCCCCCCCCACTGGCCCGCCCCACCCAAAACAGTCAGGTTATAAAAAACATCGGACGC15.263157894736842No Hit
CCCTAGCGCAGAGCGCGGGGGTACCCCAAGCCGACCAGCCCCACCCCTCAGATGTCGGAGCAACCCGCCTGCCGC15.263157894736842No Hit
GTCTCGCCCTCGCCAGCTTGTGGCGACGGGGGGAAGGCTCCGCTCCTGTCGCTTATACACATCTGACGCTGCCGA15.263157894736842No Hit
GCCCCGGGATCCCCACGGCGCCGCCCGCCCCGCCCTACCCGCGGGGATCCGGCGCTAACGGGACGGCTCCCGCCT15.263157894736842No Hit
GAGAAGGAACTTGTGAAATGGGGGAGCCGGCTGGGGTTGCCGGCACCATGGAGTCACCTTGTAGCCCGGGACCTG15.263157894736842No Hit
ACCGTCTCCTCATAAAATCTTAATAACATAAAGTCTGTAGAATGAGTAAGGCTACAAGTACACAATTTTCTAGGA15.263157894736842No Hit
GGCTGAGGCGACTCAGAGTCGGAGCCCGACACAATGGCGGTGGCGGCGGCAGCAGCGGAGGGGCCCTAGAGCCCT15.263157894736842No Hit
GTCAAACACCATTCTCCTCCTCAAACATCAGAGAAGCGAGCGTGTACCCTCACGGGGAGGGGCCAAGCCGGCTCC15.263157894736842No Hit
ACTAAAACCCACCACGACTCCAATGAGAGAATGGAATACACTCAGAATGATGAGTGACTCCGAGGAAGTCTCTGT15.263157894736842No Hit
GTGGAAGGCTCTGGCTTCTGTGAGGATGAGAGGATTGGTCAGCTGTAGTTCAGCTGTCTCTTATACACATCTGAC15.263157894736842No Hit
GGCCGAGAGGGCGGGGAGCCGAGCAGGGAAGTCGAGAGGGCTGAGGATGCGTGGTGCAGTCTGCGGCGGAGTCAG15.263157894736842No Hit
GCCACGGTCACGGCGCGGTGGAAAGCGAAGGCCATTGAAGACCCTGTCTCTTATACACAACTGACGCTGCCGACG15.263157894736842No Hit
ACTCAGACGGAGACACCCACTCTTTCGGCGCTCGCGGCGGCTGGAAGGGACGAGAGCCTGGCCTGTCTCTTATAC15.263157894736842No Hit
GTGTGGTCTCGGGCAAGCTATTTCACCTCTTGGAACCGGCTTCTCATCTGTATAATCTGTCTCTTATACACATCT15.263157894736842No Hit
GTACTCAGCCAGCAGGAAACGGAACCGGGCTGCCGGCTGGGGGCGGGACAAAACCCAGCTCAGAGGCGGAAGGAG15.263157894736842No Hit
CAGCAGTTAACCCTCCTTCATCAGCAGCACCAAACGCCGCAGGACTTCGACCCGCGGCAGCCTCCGTCAGTCATC15.263157894736842No Hit
AAAAAGGATCGAACTCATTTAAAAACAAGACATATAAATCATAATAAAATGTACCAACAATGTATCCTAGAAAAC15.263157894736842No Hit
GGGCCGGGCAGCAGCGGGCGCGCGGGTCAGCGCCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAG15.263157894736842No Hit
GGGCACCGGCTCGCCGCCGCCGTGCTCAACTTTCAAAGCACGCTCCCGCGCGCGCGCCGAGTCGTTCCTGTGGAC15.263157894736842No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)