FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr48.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr48.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATTCTTGTATAAAGAACACTATCCTATGGCGGCAAAGCAACCAGATGAAAAGATGTTGGCTAAATGCTGTTCA15.88235294117647No Hit
TAACCCAACAAAAAAGAGGACCAAACAAATATGGACATCATCCACATCTAACTCTAACTATAATACAAAACTGAA15.88235294117647No Hit
CCTTGCTCCTCCTCCCTACCACACGGTCTCCTCTCCTTCCGCATTTTCACCTGCTCCACCCTACATCAAGAAGAG15.88235294117647No Hit
GGAAAGAAACTAGAGCGCAGTAGATGGATTACGATGTTCTTCAGCGTCATTCGACCGAACCTTATATTATTGTGC15.88235294117647No Hit
CCATAGAGGCGATCATCCATCCGGAAATGATCTCGAATGCAAACAACACGCTGTGGTTCTTCATCATAACCTCCA15.88235294117647No Hit
GGGGTGAGTGTGTGTGCATGTGTGTGACAGAGGAGAGCCAGTGCATTGTGGGTAGCACCGTGTGCTGCATCTGTC15.88235294117647No Hit
TGGCCACTTCCTTTCACCAGATGAGAACCTATCAGGGCTCGCCCATAGAAATGGTGTGTGCGCTACTGCCACCTT15.88235294117647No Hit
CCCTCATAGAAGGAGGGACTGAAGAGGGCAACTGTCTGCCCCTTCCCACCCCAGACTCTGTCTCTTATACACATC15.88235294117647No Hit
CCTCTAACCTCAGTGCACATAGCAAACAGATGGAAGAGATGTAAACTAGGTAAAAGCTGTCTCTTATACACATCT15.88235294117647No Hit
GGGGGAGGGGGACGCTGGACTATGCAATAGACTAGGGTAGGAGCGATGGCACGGGCGCGAGGCCCTTGTCGTGTC15.88235294117647No Hit
ACCCAACTATTCTTATTCAAACAAACACAGGTAGACATCTGTAGCTGTCTCTTATACACATCTGACGCTGCCGAC15.88235294117647No Hit
TTCCTCAAGTGACACTCAACTTGCCAGATTATTTTGTCAAGTGAACAAGAGCTAAGCACACAGTGTTGTGTGTGT15.88235294117647No Hit
GAGCAGAGGTTGAGTCCTGCCTGAGGGTATTCATCAAAGAAAGCCACAGGGAATTGGCTCAAAGCAGGGAGGCTG15.88235294117647No Hit
CCTAATTACGGATCCCAAAAACTACTCCACGGCTCTGCGGATCCAGTCTGACACAGCTAACCATATTACACTTCA15.88235294117647No Hit
GGCCTTCCCAGGCCTCGGAGCCCGCGGCCGCGAGCGCCCAACACAAAGGGTCGCGGCGGGGCTGCGGGGGTCCTG15.88235294117647No Hit
GCACTCATGTGCCACAGGGTGTGTTCTCTGCTTCTAGCTTGGGGCTGTCTCTTATACACATCTGACGCTGCCGAC15.88235294117647No Hit
CAATAAACGTGCGAGCGTTAAAGACTACCCAATCAAGCCGATCGCGAAACCGCTCGTCCATCTCTTCAGCGGCTA15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)