FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr44.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr44.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAAAGGCGCTGGCGCGGGCAAAACGATGAGTAAGATCCACCGAATGCTCGCCGTTATCTTCATCGTAGATGG12.380952380952381No Hit
ACTTCTGACAACCGTCCTCTCTCCAGCGCAGCCAAGTGTAAAGCACGGGTATTTCAGATGCGTCAAGCAGTGCCA12.380952380952381No Hit
GCCTTGGTAGACAAAAGCATCAAGCAGCCATATAAGCCCTCGCAGGCTTCACGCCAGTCAGAGACGATGTCCGTC12.380952380952381No Hit
CCCTTAGAGCGTGCAGTGATCCAGCGGTGACTCACTGGAGAGTCACCCTAAGGGTGGGAGGTGAGAGTTTACCCT12.380952380952381No Hit
CATCAAACCACCACAACAGAGGAACATAAAACTCTTCAACAGCTAGGAGATAGATTAATACTTCTATTTTAAATT12.380952380952381No Hit
AGCTTACACAGCCAGGCCCCCAAACAGGAACTTGACTGACTTAGGGGAGGTACGGGGTTTCCCGTCCATCCGGCC12.380952380952381No Hit
GCTGTGAGGAGGCACCCGGTCGACAATAAAGCCCGAAGCCGGAATTGCCCAAGCCTTACCCCACTTTTAATAAAA12.380952380952381No Hit
CACCTGAGCAGTGCGCTTGCGTGTTGCTAACTAACATCCCTTTTTTTTTTTTTTTTTTTTTTTTTGCCATTCCCT12.380952380952381No Hit
GCCAGACACAAAGTCATGTGCTGCAGGTGAGAGGCAGTCTTTAGGTCTTGATAGTGGATCCTTATCCTGGGACAC12.380952380952381No Hit
AGATGGCCCAGATGTCCTGGTTATGTCTTCTCAGATATTCATCTGCATCCCTGTCTCTTATACACATCTGACGCT12.380952380952381No Hit
GCCCTCTCCCTAGCCCGCCTCCCTGCCCGCCCGTGATGTCAGGAGCCGCCGATCCAGGGGGCGGGACCTGTCTCT12.380952380952381No Hit
GTACCAAGCGCGCGCAGGGGGAAGGGCGACTAACGTGACAGCGCCTGGACCCCTCCCCATCCTCCGGATTCCTCC12.380952380952381No Hit
GCCCAGAAGCTCTGCGACTCTCGCCCTTCCTAGAAACGGCTGGCACGCAGGAGTCCACTCGTTCACCCGTCCAGC12.380952380952381No Hit
GCTTAGGCTTCAGTGCCCGCCTCCCCGGCCCGCACCCTACCTGAGGCTGTAGTTCACGGTTACTGCCTAGGGCTA12.380952380952381No Hit
GGCAGACCCCGTGCTCTCACCAGGAAGGTGGCCGGCTGTCTGGAGCTAAAGATGGCGCCGCCCAGAAGCTCTGCG12.380952380952381No Hit
GGGTGCTGCCTCAGCGGCTCTGTGCTTCTGCCTGTCCCAGAAGCTGTCCGGTTCTCTGGCGCACCCTCTCACCTG12.380952380952381No Hit
CCTCTGCTCCGGGCTCAGGATTTTCTGGATCGTCTTGTCCACCCCCCAGTGGTCTGAGGGTGACATTGTACCGCT12.380952380952381No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTATCCCTAACCCTAACCCTAACCC12.380952380952381No Hit
AGGAAACACGGCGACATGCAGCATGCACTAGAGCAGGCACACGGAGGCTAGAGCCTGTCTCTTATACACATCTGA12.380952380952381No Hit
AGCCAACACCGGGGCCCAGCTGCAAACGGGACTGTACCTATCTCTTATACACATCTGACGCTGCCGACGAGCGAT12.380952380952381No Hit
GGATAAGCACAATGCACACTTGCACTTGGTGGCTCTCAGCTTGTACCCATGTCTCTGATACACATCTGACGCTGC12.380952380952381No Hit
CTTCTTGGCTGTGCAGAGCTTGCAGGCTTTGTCCTGCCCCTGGCTCTTATACACATCTGACGCTGCCGACGAGCG12.380952380952381No Hit
GGAGTGAGGGGAGGGAGTTCTGGTCGCTCACGCTTCGCAGCTATGGCGCCTCGGGGCCGCGCCCAGTCCCCAGTT12.380952380952381No Hit
GGCGCGCCCTCCGCCCGCTGTGGTAGAGGCGCTCACTCACCTGAAGCGCTAGCGCTGGGCCGTCAATCTACAGCA12.380952380952381No Hit
GGAGGAGACGGGGTTGTGCTCCTGGGCAGCGGAGGAGCGAGGGGCGGGGCCGGCGAGCGGCGCGTGCACTGTCTC12.380952380952381No Hit
GACCCAGGGCGCGTGGCGTCCCGGAAGCCCCGCCCGGAGGAAGGCTCACTGCCTGTCTCTTATACACATCTGACG12.380952380952381No Hit
CCCCAAGACCAAGTGATGTGGATTCAGATCGCCAGGCTGAAAGGCTGCGCGGTGTAGGGCCTGTCTCTTATACAC12.380952380952381No Hit
ATCTTATAGATAAAGACATATAGCATATTATATTGCCTTGAAACAAATTTTAGTGTTTACCATTCATTCCTATCA12.380952380952381No Hit
GTCCAATCTTCCACCTCTGTTCAACGTTTCTCTGTGGGTATCCGCATCTGTAGCTGCTCAATAGAGCCTCTCAGA12.380952380952381No Hit
CAACAAATCTCAAGCTGCAGATCCTCCCCTCAGTCTGAGGAACAGCCCAATCATTCCATAGGAGCTGTCTCTTAT12.380952380952381No Hit
CCCTTACCTTATGAAAGGGGTCACAACCCACAGGTTGGTAGCCGCTGCTTAGGACCATAAGTCTGTCTCTTATAC12.380952380952381No Hit
GAAGTATCCTGTGAGGCTAGTCCTGCCATTTGGGCTCTGCTGGGGCTGTCTCTTATACACATCTGACGCTGCCGA12.380952380952381No Hit
TAATAATGCTCAGACTGCAGGGAGTAAGTGGAACTAAATTAAAGTATTGGCGTCTGTCTCTTATACACATCTGAC12.380952380952381No Hit
GGGTGGGGATGGCATGGTACCCAAGTAGGTGCAGAAGAGGAGGCTTTTGCAAGAAGTTCAGCCTGTCTCTTATAC12.380952380952381No Hit
ATATCACTTCCAAATTTGAAAATTTATAAGAATAGTTGAATTACATTTATCTCAACAAACTAAAACACATAAAAA12.380952380952381No Hit
GTCGTAAAGCGCTCCGTCACTCTCTTTAGTCCGCCTCTGTGGCCTTCTGGGAGCGAAGCCTGTCTCTTATACACA12.380952380952381No Hit
ACCCCCAGCTGCCCACTCCACAGGCCAGCAGGGCCAAGTATGGCAACCCCTGCCTCGGCCAGTAAGAAAGAAAAT12.380952380952381No Hit
CTGCTCAACTCTCCACATCCAACAGGTGTCCTGGAGTGAGGACACCGCCCTACCTCCACTCCTGTCTCTTATACA12.380952380952381No Hit
CCTCCCACCCACCCAGATTTGTAGGAGTCTGGTGGCAGGATGAGGGAGGAGAGGCTGTCTCTTATACACATCTGA12.380952380952381No Hit
GTTAAGATGTCCATATTGTTGTTTTAGGCCCGCTAGAAATGCGCTACGGGAATTTAATATTGTTAAACACTCAAA12.380952380952381No Hit
GCAATGGAGGAAGACACCTCATGCCAACCTCTGACCTGCACTTGCACGTATATACCTGTCTCTTATACACATCTG12.380952380952381No Hit
GCTGCGGGGCAGCATCCGAGCGCTGCGCGTGTCCGGGCGCTCGATCGACTCGGCTCCCTGGCGTGTCACCGGGCC12.380952380952381No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)