FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr42.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr42.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAATAGACGCGTGGTTCAGTGCGTCGGAGATAATGGCTGTCTCTTATACACATCTGACGCTGCCGACGAGCG13.8461538461538463No Hit
TGAGGGTGCCGTGTGGATCTCAGCTGGAACAATGTTGATCTGTCCCTGTCTCTTATACACATCTGACGCTGCCGA13.8461538461538463No Hit
GTGCCAATTTTACAACGCGAAGGGCGTTTCAAATTTGATCTGACGGCGGGCGATTTTCGTAGCGGTAATAGTCCT13.8461538461538463No Hit
CCCCTACCCGGGGGCCCCGGCGGGCGGCGGGGGCGGCCGCGGCGGTGCTGGGCCGGTCCCGCCGAGTGAGGGCTA13.8461538461538463No Hit
GCAGGGTTCAGCTTTAGTTCATTTGAAAGAAGGCAGGACCAGGGAGCTCCTGGCAGCAAAGGAGTTAAAGAGGCT13.8461538461538463No Hit
GTTTTGTATCCTCACGCCAGAAGCCCCATTAGCATCGATAAGCGCAAAAGCGTTGCCCAGATATTGCGAGAGCGT13.8461538461538463No Hit
GAGGAAGAAATTTCTCGCCAGCTGCTGGGTAATGGTACTTGCCCCTTGTGACGCGTGGCCGGAGAACAGCGCCAC13.8461538461538463No Hit
CCCCTAGTCCTTGCAGCCCTTAGGGGCTTCAAACGGTCCGGAGAGGAGGCGCGGGACCCTTCTTAAAGCGGCGAT13.8461538461538463No Hit
GCGCTGCGTCATCGGGATATAATTATTGCAAAAATAGATTTGTTTATTCAAAGAATCACTCCTGTCTCTTATACA13.8461538461538463No Hit
GGTGATAACATGGACTCTTCATACAGTAAGACTCACCATAGCTAGAGTTTATGGAGCAGAACATTACCAAAAGAG13.8461538461538463No Hit
CCTCAGTGGTATCCCCGAAGGAAAGGAAATATATCTGAATGGGATTACCTTGTGTGGTTAAAAATAATCTTATCT13.8461538461538463No Hit
GGCTGTGGCTGTGGGGCCGGCTGTGACTGTGGAGCCGGCTGTGGCTGTGGGGCCTGTCTCTTATACACATCTGAC13.8461538461538463No Hit
GATCTGGGGCACAAGTCCCTTCCGCTCAACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTATTGCCCA13.8461538461538463No Hit
GATGTAAATAAGGTGTGACAGAAAAAAAAACGGCGCATAAGCGCCGCTCATGGTGAATTCTTTTAACCCTGTCTC13.8461538461538463No Hit
CTTCCCTCCCTCCCTGCCTCTCTGCCTGCCTACCTAACAACCCACCCACCCACACCCCAGGACCCGGGCTAAATA13.8461538461538463No Hit
CTCTGTAGCATGTTGAACTTGTGCTCCTAAGTGAAAGGGCCAAATGGCAACACACATGACTTTGCAGTTCACACC13.8461538461538463No Hit
CGAATAAGTAGACCACAGCAAAGGGAAAAAGTGTGGGGAAAGAGCTGTCTCTTATACACATCTGACGCTGCCGAC13.8461538461538463No Hit
CTTGCAGACCTGTGAGCTCCGCTGCATTCATCAGGTGCTGCCAATATGAAGACCTGTCTCTTATACACATCTGAC13.8461538461538463No Hit
AACCTGACTATCAAGCCCTAAAAAAACCTGAACAAACGTAACCTCATATAGCTGTCTCTTATACACATCTGACGC13.8461538461538463No Hit
ACATGACCCTGCTCTTCAACACCGCCTACCACCTGGCGCTGGAGGGGAGGCCCTACCTCGACTTCCGGCCCCTGG13.8461538461538463No Hit
ATCTTGCACTGGTCTTGTCTGGCAGGGAAGTGTATTCCTTGCCACTTGGCCCCGCCCCCACTTCCTTCTCCGTGC13.8461538461538463No Hit
GCGGTGGGCGGGGCGCATGCGCGGGTTGGGCTGGGTGGAGGCTGTCTCTTATACACATCTGACGCTGCCGACGAG13.8461538461538463No Hit
CTCCAGACTCCGCCTCGCTGGTGGCTGGGCCTTTAGGGTATTAGGTCTGTCTCTTATACACATCTGACGCTGCCG13.8461538461538463No Hit
CTGCTAGGCCGGTCCCCGGCGCAGTTGGGCAGCAAGAGCCAATGGGCTGTCTCTTATACACATCTGACGCTGCCG13.8461538461538463No Hit
CGGCAAAATGGGTCTGGCAATGGAATTAATTATGCTGCCGCTGGTGCAACGATTGATGGAAGGAAAGAAAATCGA13.8461538461538463No Hit
AAGCTGGAGCGTGGCTGTGCTCTAGTTAAGGGCCTCAGGGGTTAGGGAGTGGCCAGGCTGAAGGCTACTGAGCCC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers