FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr34.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr34.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTTACCCACTGAGCCATCTCACCAGCCCCCGGGTTTTGTGACCTTAAGTTCCCTCCCTTCCATTACACTGTA13.8461538461538463No Hit
GACTAACAGGGAGACATATTATGAAGCAAATAAATAACGAAGCCAAAGCAAGCCATTCATGCTGCAATGCCCAAG13.8461538461538463No Hit
CTCCAGAGCGGACCCGCCAAACCCACCGGACACTAGAAAGAGTCAGGGCCGCCAGGGCATCCTTCGGATGACCGT13.8461538461538463No Hit
GTCCTATAACCCAACTATGCAGACAGCAATAAGAACCTATGCCTATTGACACCCAGTCTCTAAAACACAACTGAC13.8461538461538463No Hit
CTGAGGTTGTCAGCTTGGTGGCCAGGGCCATACTGGCCACCATACTGCCTAATTACATATGAAGTGAACCAGGCC13.8461538461538463No Hit
TCTTAATACCTTCCTCTCTTTCTCTCCCGCCGAGAGCATAAACAGCTGTCTCTTATACACATCTGACGCTTCCGA13.8461538461538463No Hit
TGATTGAGCAGATGAAACAAATTACCAAAAGACACATGAAATAAATCCACAACGGTAAACAAGGATGAATCAAAT13.8461538461538463No Hit
CTCACGTGCGAGGTCAAACTGACGACGGAGCGCTCCTGAGGGGCCTGGGTTCCTGCTGAGGCAGCCGCAAGGGGG13.8461538461538463No Hit
CAATACCTCTGACTCCAGAGTGATATACTCCTCACCCACTAGATATTACAATACTGTAACTTATAAACATATGAC13.8461538461538463No Hit
CACAAAGAGTTTGGCTGGAAGTCTGGAACACATGGTCCAGGCGAAAGCACAGAATACAGGCTGACGCTGATCCAG13.8461538461538463No Hit
GCAGTAGTGTGTGGGAGGGGAGGAGAGAAGGTGACAGGTCTCTCAGAAAGCAATTAAGCCTTTCAAGGTAGCCCC13.8461538461538463No Hit
CCTTAACTTTACAAATTAAGGTGGGAAGCAGGTTTACAGGAAAACACCTGAATTTTTCCTTGTTCTCAGCCTCTA13.8461538461538463No Hit
CATCATTATATAACAGTTCGAGGACAGACATGTAAACAAAGAGATAACCAGCTACACCAGTCCTACACAGAAAAA13.8461538461538463No Hit
TAGCGTGTCAGCTCCTGATTCGTTGCTCGCCCATCACTCCATTACTACGCCCCGAGATGGGCAGTGACTAGGCGC13.8461538461538463No Hit
TCCCTGGTCTCTGCTTCATTTCCTGCCCTGCCCTCCATTCATGATCTGTCTCTTATACACATCTGACGCTGCCGA13.8461538461538463No Hit
GCCCACGTCAGCGCGCCGAATCCCCACCCGGTGGCTCGCGCGGGGCGGGGCGGGGTCCCCATGACGCCTCGGACC13.8461538461538463No Hit
CATAAAAAGTGTGTAGGCAGGAATTGAAGATACATGTACAAAGGGAGGAAGCCTAGCTTGACAGGGGCAACACAC13.8461538461538463No Hit
CCTTATTGGTCTGGGCCTCTGGGCGTGACCAACCGTGGACACGCCCTGTCTCTTATACACATCTGACGCTGCCGA13.8461538461538463No Hit
AAAGGAACTCGGCAAACAAGAACCCCGCCTGTTTACCAAAAACATCACCTCTAGCACTGTCTCTTATACACATCT13.8461538461538463No Hit
CTGATTGGCTGCGGCCAAAGGAGGGCGGACGCCACGCCCCCGTCGGGCCGCGGTAGCGCCGCCCCCAGGGCGGTG13.8461538461538463No Hit
CCACAGCAGTTGCTGCCTCAGTCCAAGGTCTCCTCCTGATGAGGATCTTCGTCTGTAGTCAAGTACACCAAGAAG13.8461538461538463No Hit
AAATAAAACATTATGAAATCACTAAAAAAAACAAGATGGAGATAAAAAAATGATATAAAAATAGTTATAACAATC13.8461538461538463No Hit
CAATTGCACAGGCAGCACAGGGTCAACTCACTGACAGCTTTCTTTCATTCTTTTCGCCAGGCGATACACCAGTCT13.8461538461538463No Hit
GCTCTGTTCTCCTCAGGCTTGATCACACTCCTCAGGGAGCAGCCTGTCTCTTATACACATCTGACGCTGCCGACG13.8461538461538463No Hit
CAAAAATAAATCTCGACAAACAAAACAAAAAGCCTGAGACAGTTTCAATCAGCAACTAAAATCAAAGCGATTATA13.8461538461538463No Hit
CAAAAATGGTTACACAACACTTGACCATATATGGTAATTTCAAAAACTCATAAATAAAGGTACAAATGATCAATA13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)