FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr33.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr33.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAAATGTGATCAGAAAAAGGGCCTGAGAGTTCATGATAAGGTCCTGGGCGTCGGGTTCCATGCTGTCACTAAT14.3478260869565215No Hit
GGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGGAGCTGTCTCT14.3478260869565215No Hit
GAACATTTATCAGACAAGCAATTCATTATGATCTGTGAATGAAAAAGATTGAGAAAGAAGCTGTATCTTATACAC14.3478260869565215No Hit
GCACAGGGAGTGAGTGGCACTATTAGGTAAGACCTAGTTGGAGTGGGTGTGGCCTGGTTGGAGGAAGTGTATCAC14.3478260869565215No Hit
GGCCATGGGCAAGCAGTTAGTGGCTTCTTCTGTACTTGTCTGGGTTGAATTTTCTGTACTTACTGCAGCTGTCTC14.3478260869565215No Hit
CACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTGTCTCTTATACACATCTGACGC14.3478260869565215No Hit
AACCAGGTCAGCAGATTCTGTTTGCCCGGCTCTACTGCCGTTTTCATTTTAATTTGCACCTGTTGTGCCTGTCTC14.3478260869565215No Hit
CAAAACAGCAAAACCCCAACAACAAACCCCACAATAACAATAAACGCCCCAACACACCCCACCCCACAATACCCC14.3478260869565215No Hit
GAGCAGATGTTATCCGGTTGCTAGGAGCGTTGCTAGGAGGCTGTCTCTTATACACATCTGACGCTGCCGACGAGC14.3478260869565215No Hit
CATCACTACAGTACCGGACATTCCCTGAATGATAAAAAGACGAACCAATGAAATCTCGTCCACACTATTTACACA14.3478260869565215No Hit
CTGGTAGAGGAGGCGGCGGCGGTGGCGGCGGCGGTGGTTCCCGCGCGCTCCGGGTCTCTGAGGCTGAGGGTACTG14.3478260869565215No Hit
AGAAAGTAAACTTCTGATTAGTATCATTCTGAAATCAACCATTTTAAAATATAAAGAAGGAAAACATACATCCTA14.3478260869565215No Hit
AATAACAACAACCCACTCCACAAAAACTATAATATCGGAATCTTCCTTTAAATACCCACATACAAACCTACTTAG14.3478260869565215No Hit
TGTTCACCCAGTAGGGAAGAACCTCCCTTGAACCAGTGAGTTGCTTTGTTGTTGTTATGTCCTATAGCCCTGTCT14.3478260869565215No Hit
CTATCCTAATCAAAATCCTTGAGCTTGCTGTATTAGTATCAGATGACACTTATAAAACTCTGACTCTCACTACTA14.3478260869565215No Hit
TCAGTGCTGTCTGCCCCTCCCACCTCAGTAGTTTCGGACCTGTCTCTTATACACATCTGACGCTGCCGACGAGCG14.3478260869565215No Hit
CTTCATACTAACAAAAAACCTTCTTTAAAAACCAAATAAAATAAATAAAACTTTTCACAACAACAATCTAAATAA14.3478260869565215No Hit
GTGCTATGGGATGCCACAGTTCCAGGAGACTAAGTTTACGTGAACTTTTCGCCTCAGGACTTCATCCAGGTTTCT14.3478260869565215No Hit
CTCCTGCTCAGAGTTATGGCGTGGGGAGAGAACATTTAATCGCGTGGTCAAGTGGTCGCATCACAGTAGCAACCA14.3478260869565215No Hit
ATATATGTCAAACCACTTCAATAACGGTAGACAGGTTTTATTATCAAAGAAAACACATGCATGATAACAACATAT14.3478260869565215No Hit
ACTGACAGCCAAGGCAATTCGACAATAGCTATTAAAGCTACATTAGGCTTGAAGAACAAGCATTGTGAATAACAA14.3478260869565215No Hit
TGTCCCTGCAGCTTGCAACCTGCTGTACTGTTGGGAAGGTCGCAGTAGGTGGGTGTGGGATTCATTGCATAAGCC14.3478260869565215No Hit
GTTTCAATAGGCGCCCGCAGCCATGGAGCTGGGCAGCCGGCTGGCAACGCCCGCTCCCGACGCTGTCTCTTATAC14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)