FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr28.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr28.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2891
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGAC150.00211711169.069
GCTGCCG150.00211711169.067
CTGCCGA150.00211711169.068
CGCTGCC200.006619524751.7566
GACGCTG200.006619524751.7564
ATCTGAC400.002180353734.560
Produced by FastQC (version 0.11.5)