FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr23.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr23.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCAGATCGGGTTCACCGGGAGGGAGTGGGTACGTGAGGATGGCGTACACTGTCTCAGATTCAGTTGTGACGCG14.3478260869565215No Hit
GCTGAGACCTCAGCCAATGGTCACATGACTATCCATGAGCTCAACAACAAACACAGCTAGGAGAGCGAATTGGTA14.3478260869565215No Hit
AGTCTGAGCAGCAGCAGCAGCAACAGCAGGGCTAGGCCTGTAGGAAATCCCCCAAAGCAGGAAACAATAGAGGCT14.3478260869565215No Hit
CCATTAATCAACGCACAACCGACACTGCTTCGGAACCTAAGCGAAAACAGAATTATACCTCACAATAAGAAACTT14.3478260869565215No Hit
TTATTCCTCGCCAAAAATCACTTCATATATATTGTAAATAACATATTCCGTTATTATCAATTTACTCGCAATATT14.3478260869565215No Hit
GCATAGGACTAACATCACAGAGACCCGAAAAAAAAATGTCACATCCTGGCAGTAACTGAGTCAATAAAGGCTACA14.3478260869565215No Hit
GGGGTGGGGCAGAGGGGCGTGCCGCGGGGGCGCTGCGCGGGGGGGGCTAAGGCGCTGTGTGTGCCGCCGAGCGAT14.3478260869565215No Hit
GCTCACAACCATCTGTAATGGAGTCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGAGTACTCACATAC14.3478260869565215No Hit
ATATAACAGCACTCCAGCACAGAAAGGTAGCAGACCATCAGAACAAGCTCAGGGAAGCAGGGCATTTAGAGGGTG14.3478260869565215No Hit
CTTTATATCAGAGCCACGACCTAAGGGAGCCCGGACGGCTAGACGTGGGAGTCGGCTCCTCCTCCTGGCGGAGCC14.3478260869565215No Hit
CAGGCTACCCGCGGGCTATACCGGAGAGTCTGGGGCAGGAACTGTCGTCTTGCTGACACCTGTCGCTTATACACA14.3478260869565215No Hit
AGACAATACAGGTATCTCAAACTCATTAAACCTCTGAATATGAGTGTGAACAAGGCATAGTCATTAATCATGAAA14.3478260869565215No Hit
GTCTTAAGGGTTCCCAGAAGGTCAACTTCCCTTGCCCTCCCCCACCCTGTCTCTTATACACATCTGAAGCTGCCG14.3478260869565215No Hit
CTAAAGAGCAGCACCCAGAGCAACATCAGCCCCGCGGGCAACAGGCGGCCACGACGTCCGCGAGGGGCCATGTCT14.3478260869565215No Hit
CCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT14.3478260869565215No Hit
CCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCCTGTCTCTTAT14.3478260869565215No Hit
CAACTGAAAAATAAGCATAATAAAGGGACTTACTGAAAAGAGATGAGCAAAAAGCCAAAAGTCGAACGACTGCAA14.3478260869565215No Hit
ATACAGACCTAGCTCAGCGCTCAGGTTGCATTCAGAGGAACTCGCATGCTCTTGGTGATGCATACCCATCCCTCC14.3478260869565215No Hit
GGTCAGGGCTTATTCTATAATTCAGGTTCGTTTCACCTTTCATGTCAACATGCGACTCAGCGCAAAAGATACTGC14.3478260869565215No Hit
GCCCGCTCCTTTCGCGTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGG14.3478260869565215No Hit
GTTGTGAGCCATGAAAGTATTTTCCTCTGGAATAGTGGCAAGCTATTGAACCATCTCTCCAGCCCCCAAATATTT14.3478260869565215No Hit
GAGCAGGGTTGCTCTGGAAGGTAGTCATTCATTTCTCTTGTTGAACTTTGAGTCTGTCTCTTATACACATCTGAC14.3478260869565215No Hit
CTCCTAACCTCTGAGCCATCTCTCCAGCCCCATCTGAGGTGTTTTCAAAGCCGATGACACCTGTGCATCCCAACC14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)