HKVH7DRXX_n02_dpr143.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKVH7DRXX_n02_dpr143.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	501471
Sequences flagged as poor quality	0
Sequence length	75
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	788	0.15713770088399925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTACG	45	1.8576247E-6	46.00598	2
GCCCGTA	40	5.0000184E-5	43.12201	7
GACGATT	35	0.0013475517	39.425835	22
CTAAACG	40	0.0025932896	34.50449	2
ACCCGTT	40	0.0025945583	34.50105	50
TTACCGT	40	0.0025945583	34.50105	34
ACGAATA	40	0.0025945583	34.50105	62
ACCTTCG	40	0.0025958277	34.49761	7
CGGGTCG	55	3.2538513E-4	31.364588	52
TGCGCAA	55	3.255755E-4	31.36146	10
TAGGCCG	55	3.255755E-4	31.36146	5
AACCCGT	45	0.004619546	30.667599	49
CAAATCG	45	0.004619546	30.667599	46
GACGAAT	45	0.004619546	30.667599	61
CAATCGA	45	0.004619546	30.667599	46
ATACCCG	45	0.004619546	30.667599	43
GCGCATT	70	3.845937E-5	29.572327	38
CCGACGT	85	4.417134E-6	28.41546	69
GTATAGA	100	5.002512E-7	27.603588	1
TGCCCGT	50	0.0077296845	27.600838	66