FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n02_dpr11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n02_dpr11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCGCGTGATGCTGAAACTGGAGAGTTTTGCCAGTGAAGAAACGCGCCAGCGCCATCCGTTGTGTGTGGACGTC16.25No Hit
GTCCCTCCTGGAGGGGGCGCCCCGGACGGTCGACGCGCGACTCCCAGGAGCCGGCCACTTGGCGGTCAGGACCCT16.25No Hit
GTGCGGCTCCTGCTTCTGTGCTGCCTTTGAGGCTGAGGTGCTACATCTGTCTCTTATACACATCTGACGCTGCCG16.25No Hit
ATCATGGAAAATGAGAAACATCCACTTGACGACTTGAAAAATGACGAAATCACTAAAAAACGTGAACAATGAGTA16.25No Hit
GCCCTGGTGCTGCGGGCAGGGATGAGTGCCTCTCTGGAGCTCTTTGGTCAGCCAGCGTGATGGAATCAGTTAGCT16.25No Hit
TACATTGACACCAGAATCCTAAAAAAGTCCCGCACACCAAGAAATCCCAGCTGCAACATGAAGCATCAACACAAC16.25No Hit
AGACTATGATCCATAAGCACATCCTCCGGTTATCGCATACCTTATAAGGCCTCTCTCTTATACACCTCTGACGCT16.25No Hit
AAATAATACAGAAAATAAAATTAATAGCTCACACAAACAACATAAAAAAATAAAAAAAAGAAGAACCAAAACAGA16.25No Hit
GTATTTCGGCCATCAGACTGCTGAAACTCTCAAACTCCAGTTCAGCAAAATTGAGGTAGATTCGCCCAATGGGAT16.25No Hit
ATTGTAAGGAGTGGAGGCCCTGAGGGAATGTTCATTGTCTGTCAGTATAATAAAAATAAAATTGGTCTATCTTTA16.25No Hit
GTCAGTACCTAGACCAGCTCCGTGAGCCTGCGGCACAAGCTAGACACTCAAGCTCCTGTCTCTTATACACATCTG16.25No Hit
GCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTGACTGCAGCT16.25No Hit
CACTTGTACGCCGAACAAGTCCGATCAGCCATTTAATAGAGAAATTTGCGCAGCCTTACACACATCGCTAAGATC16.25No Hit
TATTATACCTGGGGTAAAGTCAATTGACATAAAATTCCTTATCTGTCTCTTATACACATCTGACGCTGCCGACGA16.25No Hit
ACAATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCACAGGAACCATAACTGATTTA16.25No Hit
GCCTCCGGCATCCGCCGCCCCGGTCAGCCCCAGGCTGTTCTCTGCAGGAGCTGTCTCTTATACACATCTGACGCT16.25No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)