FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length20
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTTTGAGTGTGGTGGTT12.857142857142857No Hit
GGTTTGTGGGTGGTGGTGTG12.857142857142857No Hit
TTTGTGGGGTGGTTGGTGTG12.857142857142857No Hit
TGGTTTGTCGTTGGGTTGTG12.857142857142857No Hit
CTTGGGGGTGGGTGTGTTTT12.857142857142857No Hit
CTGAGTGTCTGTTTTTTTGT12.857142857142857No Hit
CTGGTTGTCTTGGGTGGGGG12.857142857142857No Hit
GGTGTTGGGGGGGGGTGTGT12.857142857142857No Hit
TGCTTGGTGTGGGGTGTTGT12.857142857142857No Hit
TGCTTGTGGTGTTGTTTTTG12.857142857142857No Hit
CTGGTTGTCTTTGGTTGTTT12.857142857142857No Hit
GGGGTGGGGGTTGGTGGGTT12.857142857142857No Hit
GTTGTGGTGGGTGTGGGTGG12.857142857142857No Hit
CGTTTGGGTGTTGGGTGTGT12.857142857142857No Hit
TCTTGGTTCTGGGTGGTTTG12.857142857142857No Hit
GTGCTTTTGTTTTTGTTTTG12.857142857142857No Hit
CCTCGGTGGGTTGTGTTTGG12.857142857142857No Hit
TCTCGTGTGTGGGTGGTTTG12.857142857142857No Hit
GTGGTGGGGTTGGTTGGGGT12.857142857142857No Hit
GTTTTGTGGTGGTGGTTGGG12.857142857142857No Hit
CTTCTGTTGGGTTGGGTTGG12.857142857142857No Hit
CGTGGGTTTGGTTGGGTGGT12.857142857142857No Hit
GGTTTGTGCTGGGGGTTTGT12.857142857142857No Hit
CTTGTGTTGGGTTTTGTGGT12.857142857142857No Hit
GTGCTTGGGGGTGGGTGGGG12.857142857142857No Hit
CGGGGTGTTGTTGTGTGGGT12.857142857142857No Hit
GGCTTGTTGTGGTTTGTGTG12.857142857142857No Hit
GTGTTGGTTGGTTTGGGGTG12.857142857142857No Hit
CTGTTTGTGGGTTTGGGGTT12.857142857142857No Hit
GGGGTGGGCGGGGTTGGTGG12.857142857142857No Hit
GGGTGGGTGTGGTGTGTGTT12.857142857142857No Hit
GTTGTTGTATGGGGTGTTTG12.857142857142857No Hit
GTGTTGTGCTTGGTTTGTTG12.857142857142857No Hit
GTTTGGGGTTTGGTTTTGGT12.857142857142857No Hit
GTTCTTTGTTTTGGGTTGTT12.857142857142857No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)