HKVH7DRXX_n01_dpr72.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HKVH7DRXX_n01_dpr72.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22914
Sequences flagged as poor quality	0
Sequence length	20
%GC	61

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGG	100	0.4364144191324081	No Hit

Adapter Content

Can't analyse adapters as read length is too short

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTCTG	30	0.005709998	13.997816	5
CTGGGGG	30	0.005709998	13.997816	9
TTGGGCT	30	0.005709998	13.997816	4
TGGGCTG	40	1.6406899E-4	13.997816	5
GGGGCGG	30	0.005709998	13.997816	5
GTCGGTG	30	0.005709998	13.997816	7
CTGTGGT	45	4.4478098E-4	12.442504	9
TGGGCTT	40	0.002643867	12.24809	5
GGGCGGG	40	0.002643867	12.24809	6
GGGCTGG	55	1.8289592E-4	11.45276	6
GGCTGGG	50	0.0010782665	11.198254	7
GCGGGGG	45	0.006375563	10.887191	8
GTCTGTG	45	0.006375563	10.887191	7
GGCGGGG	45	0.006375563	10.887191	7
GCTGGGG	55	0.00238802	10.18023	8