FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr70.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr70.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133
Sequences flagged as poor quality0
Sequence length20
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGTTGGTGTGGTGTGGT10.7518796992481203No Hit
GTCCTTTGCTTGGTTGTGTG10.7518796992481203No Hit
ATTTGTGTGTTTGTTTTGTG10.7518796992481203No Hit
GGGGTGGGCGGGGGTGGGTG10.7518796992481203No Hit
GGGTTTTCAGGGTTGTGGGT10.7518796992481203No Hit
GTTTGTGTGGTGTGTTTGTG10.7518796992481203No Hit
GTTCTGGTCGGGGGGGGGTG10.7518796992481203No Hit
GTGTTGGTTGGTGTTTGGTG10.7518796992481203No Hit
TTGTTGTTATGTTGTGGTTT10.7518796992481203No Hit
CTGGTGTGCGTTGTGGTGTG10.7518796992481203No Hit
GTGTTTGGATTGTGGTTTTT10.7518796992481203No Hit
TGGTTTTGGTGGGGTTGTGG10.7518796992481203No Hit
AGTGTTGGGTGGTTTGGTTG10.7518796992481203No Hit
CTTTTGTGTTGGGGGTTTTT10.7518796992481203No Hit
GGTTTGTGTTGGGGTGTGTT10.7518796992481203No Hit
CTGTGGTTGTGGGTGGGGTT10.7518796992481203No Hit
TTTTGTTTGGTTGTTGTGTT10.7518796992481203No Hit
CGTTTGTTGTGGTTTGGTGT10.7518796992481203No Hit
TTGTTGGTCTGTTGGTTGGT10.7518796992481203No Hit
GTGTTGTTCGGGGTGGGGTG10.7518796992481203No Hit
GGGGTGGTCTTTTTTTTGGT10.7518796992481203No Hit
TGTGTTGTCTGTGTGGTGTG10.7518796992481203No Hit
ATGTGGTGTGGTGTGGGTGT10.7518796992481203No Hit
TGTGGTGGGTGGTGGGTGGG10.7518796992481203No Hit
GTGGTTTTGTGTTGTGGGGT10.7518796992481203No Hit
GGGTGGTGGGGTGGGGGGGG10.7518796992481203No Hit
TGGGTGGGCTGGGGTGGTGT10.7518796992481203No Hit
GGGGGTGGGGTGGGTGTTGG10.7518796992481203No Hit
GGGTGTGGGTGGTGTGGGGT10.7518796992481203No Hit
CGGGGTGTGTGTTGGTGGGG10.7518796992481203No Hit
GGGGTGTTATTGGGTGTTTT10.7518796992481203No Hit
AGTTTTTTATGGGTTTTTTG10.7518796992481203No Hit
TTTGTTTTCGGGTGTTTGGT10.7518796992481203No Hit
GTGTTGTGGTGGGTGTTTGT10.7518796992481203No Hit
TGGGTTGTGTTTGTGGGGTT10.7518796992481203No Hit
GTGGGTTGCTTGGTGGGTGT10.7518796992481203No Hit
GGTTGTGGATGTTTGTTTGT10.7518796992481203No Hit
GGTTTTGGTTGTTTGTGTGT10.7518796992481203No Hit
GGTGTGGGGTGGGGGTTGGG10.7518796992481203No Hit
TTGTTTTGGTGGTGGGTTTT10.7518796992481203No Hit
AGGTTGTTGTGTGTGGTGTG10.7518796992481203No Hit
GTTGTGGTGTGTGGTGGGTG10.7518796992481203No Hit
CTTTTTGTGGTTTGTTGGTG10.7518796992481203No Hit
TGGTTTTTGTGTGTGGGTGG10.7518796992481203No Hit
GGGTTTGTTTTTTGTGTTTT10.7518796992481203No Hit
GTTTGTTGGGTTGTGTTGTT10.7518796992481203No Hit
GCTTTTGTTTTGTGTTTTTT10.7518796992481203No Hit
GGTTTGGGGGGGGTTGGTGG10.7518796992481203No Hit
GGGGGGGGGTGTGGTTGGGG10.7518796992481203No Hit
GTGGGGTGGTGGGGGTTGGG10.7518796992481203No Hit
CTGGTGGGGGGGGTGTGGGG10.7518796992481203No Hit
TGTGTGGTTGGTGGTGTTGT10.7518796992481203No Hit
GTGGGTTTATGTTTGGTTGG10.7518796992481203No Hit
CTTTGGTGTGTTGTGTGGGT10.7518796992481203No Hit
GGTGTTTTAGTTGGGTGTGT10.7518796992481203No Hit
TTTGTTTTCTGTGTGGTGTG10.7518796992481203No Hit
CTGGTGTTGGGTGTTTTTGG10.7518796992481203No Hit
TGTGTTTTGTGTTTGTTTGT10.7518796992481203No Hit
GGGTTTTGGGTGTTTGTGGG10.7518796992481203No Hit
GTGGTGTGGTTGGTTGGTGG10.7518796992481203No Hit
GTGGTTGTAGGGTGGTTGGG10.7518796992481203No Hit
GTGTTGTGGTGGGGGTGTTT10.7518796992481203No Hit
GGTGTTTGGTGTTGGTTGGG10.7518796992481203No Hit
GGTTGGTGGTGGGTGTTTGG10.7518796992481203No Hit
TGGGGTGGCGGGGGGTGTGT10.7518796992481203No Hit
GTGGGGGGTTGTGTTGTGGG10.7518796992481203No Hit
TGTGTGGTGTGGGGTGTTGT10.7518796992481203No Hit
GGTGTGGGGTGGTGGGGGGG10.7518796992481203No Hit
GGGGGGGGCTTGGGGTGGGG10.7518796992481203No Hit
GTGTTTTGGTTGGGGTGTGT10.7518796992481203No Hit
GTTTTGTTCTGGTTGTGGGG10.7518796992481203No Hit
AGGGTTGTGTGGGTGGTGGG10.7518796992481203No Hit
CGGTTGGGGTGGGTGGGGGG10.7518796992481203No Hit
GGGTTGGGGGGTGGGTTGTG10.7518796992481203No Hit
GTTTTGGTTTGTGTGTGGTG10.7518796992481203No Hit
TGGGTGGTGGTTTGGTGGTG10.7518796992481203No Hit
GTGCGTGGGGGGGTGTGTGG10.7518796992481203No Hit
GTTTGTTTCTGTGGTGGGTT10.7518796992481203No Hit
GTGGTGGTGGGTGTGGGGGG10.7518796992481203No Hit
GTTCTGTTATGGGTGGTGGG10.7518796992481203No Hit
GGTTGTGTTTTGGTGTTTTT10.7518796992481203No Hit
GGGGGGTTCTTTGTGGGGGG10.7518796992481203No Hit
TTGGGGGGCTGTGGGTGGTG10.7518796992481203No Hit
GGGCGGTTGGGGGGGTGGGT10.7518796992481203No Hit
GTGGTGGGGGGGGGGGGGGG10.7518796992481203No Hit
GGGGTGGGGTGGGTGTGGTG10.7518796992481203No Hit
CCTCTGGTGGGGGTGTGTTG10.7518796992481203No Hit
GTTGGGGTTTGTGGGTGTTT10.7518796992481203No Hit
TGTGTGTGCTGGGGTGTGTT10.7518796992481203No Hit
GGGGTGGGGTGTGTGGGGGG10.7518796992481203No Hit
GGTGGTTGGGTGGGGGGGGT10.7518796992481203No Hit
GGTTTTTTTTTTTTTTTTTT10.7518796992481203No Hit
CGGTGTGGGGTGGTTGTGTG10.7518796992481203No Hit
CCTCTTTTGTTTGTGTTTGT10.7518796992481203No Hit
TGTGTGGTCGGTGGTGGGTT10.7518796992481203No Hit
GTTTTTTTTTGTGGTTTGTG10.7518796992481203No Hit
AGTGTTGGTTGTGTTGTGTG10.7518796992481203No Hit
CTTTGTGTATTTTTGTTGTT10.7518796992481203No Hit
CGTGTGGTGGTTGGGGTGGG10.7518796992481203No Hit
TTTGTGGGAGGTGGTGTTTG10.7518796992481203No Hit
TGTCTGGGGTGGGGTGGGGG10.7518796992481203No Hit
GGGGTGGTGTGGGGTGGGGG10.7518796992481203No Hit
GTTTGGTGCTGTGGTGTGTT10.7518796992481203No Hit
GTTGTGGGGGGGTGGTGTTT10.7518796992481203No Hit
ATGTGGGGGTTTGGTGTTTT10.7518796992481203No Hit
GGGTTGGGCTGGTTGGTTGT10.7518796992481203No Hit
GGTCTGGGGGGGGGGGGGTT10.7518796992481203No Hit
GTTGTTTGGTGGTTTGGGTG10.7518796992481203No Hit
GGGGTGTGGGTGGGGTGGGT10.7518796992481203No Hit
CGTTTGTTCGTGGTTTTTTT10.7518796992481203No Hit
GTGTGGGTGGGGTGTGGGTG10.7518796992481203No Hit
TGTGTTTGCTTTGGGGTGTT10.7518796992481203No Hit
GTGTGGGGCTTTGTTGGTTG10.7518796992481203No Hit
CTGTTGGTCGTTGTTGTGGG10.7518796992481203No Hit
CGGTGGGTGGGGGGGTTGGG10.7518796992481203No Hit
TGTGTGGTGTGTTTTTGTGG10.7518796992481203No Hit
TTTCTTTTATGTTTTTGGTT10.7518796992481203No Hit
GTGGTTTGGTGTTTTGGTGG10.7518796992481203No Hit
CGTTGGTGATGTGGTGGGGG10.7518796992481203No Hit
TGTTTTTTGTGTTTTGGTTT10.7518796992481203No Hit
GGTGTTTTTGGTGTTGTGTT10.7518796992481203No Hit
GTGGTGGGCGTGGGTGTTTT10.7518796992481203No Hit
TTTGGTTTGGTTTGGTGGTG10.7518796992481203No Hit
GTGTGTGGCTGGGGGGGGGT10.7518796992481203No Hit
CGTGTTTTCTGTTTTTTTTT10.7518796992481203No Hit
CTGTGTGTGTGGTGGGTGGG10.7518796992481203No Hit
GTGGTTTTGTGGGGTGGGGT10.7518796992481203No Hit
GGGGTGGGGGGGGGGGGGGT10.7518796992481203No Hit
GTTGTGTGCGTGGGTTGTGG10.7518796992481203No Hit
GGGGTGTGCGGGGGGGGGGT10.7518796992481203No Hit
GGGTGTGGCTGGGTTTGGGT10.7518796992481203No Hit
GGGTTGGGCGGTTTGGTGTG10.7518796992481203No Hit
GGTGTGTGCGTGGTTTTTTG10.7518796992481203No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)