FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr68.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr68.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length20
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTTGTTTTGGGTTTTTTT14.3478260869565215No Hit
GGTGTGTGGTGTGGGTGTTT14.3478260869565215No Hit
AGTTTGTGATTGTGTTTGGG14.3478260869565215No Hit
GTTCGGTTCGGTTGGGTTGG14.3478260869565215No Hit
GTGTTGGTCTGTTGGTGTGT14.3478260869565215No Hit
GGGGTGGGCTGGGGTGGTGT14.3478260869565215No Hit
GTGGTGGGGTGGGGTGGTTT14.3478260869565215No Hit
GTGGGGTGGTGGGTGGTGTG14.3478260869565215No Hit
TTTTGGTGCGGTTGGGTGGT14.3478260869565215No Hit
GGGGGGGGGGGTGTGTTGGG14.3478260869565215No Hit
GGGGGGGGGTGGGGGGTGGG14.3478260869565215No Hit
GGGTGTTTCGTTGGTTTGGT14.3478260869565215No Hit
CTGGTGGTCTGTGGGGTGGG14.3478260869565215No Hit
GGTGTGGGTTGGGTGGGTTT14.3478260869565215No Hit
GTGTGTTTCTGGGGGTGTGT14.3478260869565215No Hit
GGTGTGTTGGTTGGTGGTTG14.3478260869565215No Hit
TTGTTGGTTTGTGTGGGTGG14.3478260869565215No Hit
GGTGGGTGGGGGGGGGGGGG14.3478260869565215No Hit
GGGCTGGGGGTGGTGGTGGT14.3478260869565215No Hit
GGTGTTTTTTTTTTGTTTGT14.3478260869565215No Hit
GGTGTGGGGTGGTTTGTGGG14.3478260869565215No Hit
TGTGGTGTTGGTGGTTGTTG14.3478260869565215No Hit
GTGGTGTTCTGGGTGTGGTG14.3478260869565215No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)