FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length20
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGG39.375No Hit
GGGGGTGGCGGGTGGGGGTG13.125No Hit
GGTCTGGTCTGTTGTGGTTT13.125No Hit
GTGCGTTGGTGGTGGGTGTG13.125No Hit
GTGGTTGTCTTTGGGGTTGT13.125No Hit
GTGCGGGTGTTTGTGGGGGT13.125No Hit
TGGTTGTGCTTTGGTGTGTT13.125No Hit
GGGTTGTGTTTGTGTTGTTG13.125No Hit
TGGGTGTGGTGGGTGGTGGT13.125No Hit
CGTGGGTGCGGTGGTGTTGG13.125No Hit
GGGGGGGGCTGGGGGTGTGG13.125No Hit
GGTGGTTGGTGTGGGGGGGG13.125No Hit
CGACATCCGAGAACAATATT13.125No Hit
GTTGGTTGGTTGTTGGTTTT13.125No Hit
GTGCTGGGGTGTGGTTTGGT13.125No Hit
GTGTTTTGCTTGTGTTGGTT13.125No Hit
GGGGGGTTTGGTGTGGGGTG13.125No Hit
GTGTTGGGGTGGTGTGTGGG13.125No Hit
TCTTTGGGCTGGGGGGGGGG13.125No Hit
GGTGGGGGGTGTGGGGTGGG13.125No Hit
GCCTTTTTGGTGGTGGTTTT13.125No Hit
CGTTTGTTCTGGTTTTTGTG13.125No Hit
GTGTGTGGGTGGGGGGGTGG13.125No Hit
GTGGGGTTTTGGTGGGGTGT13.125No Hit
TGTGGTTTCTGGTGGGTGTG13.125No Hit
GTTTTTTTTTTTGGTTTTGG13.125No Hit
TGGGGGGTCTGTTTTGGGTT13.125No Hit
GTTTGTGGGTGGGGGGGTGT13.125No Hit
CGGGTTGTCTTGGGTGGGGG13.125No Hit
TTTGTTGGCGTTGGTGGTGT13.125No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)