FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr62.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr62.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length20
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTTTTTGGGTTGGGGTTT48.16326530612245No Hit
GTGTGGGGAGGTTTGGGGTG12.0408163265306123No Hit
TGTTTTTGGGGTGGGTTTTG12.0408163265306123No Hit
GGGGTTTGGTGGTGTGTGGG12.0408163265306123No Hit
CGGTTGGTCTGTGGTGTGTT12.0408163265306123No Hit
GTTTTGTGGTGGGGTGTGGT12.0408163265306123No Hit
CTGGTGGTTTGGGTGTGGGG12.0408163265306123No Hit
GGGTGGTGTTGGGGGTGGTT12.0408163265306123No Hit
CTTGGGGGGGGGTGGGTTTG12.0408163265306123No Hit
GTGCGTGGCGTTGGTGGTGT12.0408163265306123No Hit
GGGTGGTTCGTGTTTGGGGG12.0408163265306123No Hit
GGTTTTTGGGTGTGGTTGGT12.0408163265306123No Hit
GTTCTTTGATGGTGTGTGGT12.0408163265306123No Hit
GGTGGGTTTGGTGGTTGGGG12.0408163265306123No Hit
TGTTTTGTCTGTTTGTTGTT12.0408163265306123No Hit
TGGGTGTGCTGTGTGTTTGT12.0408163265306123No Hit
GGTGTTGGATTTGTTGTTTG12.0408163265306123No Hit
TTTTGTTTTTTGTTGTTTTT12.0408163265306123No Hit
GGTGTGGTGGTGTGTGGGGG12.0408163265306123No Hit
CTCCGGTGCGGTGGGGGGTG12.0408163265306123No Hit
GGGGTTTGCTTGGTGGGGGG12.0408163265306123No Hit
GGGGTTGTTGGTGCTTGTGG12.0408163265306123No Hit
GCCCGGTGCTGGTGGTGGGT12.0408163265306123No Hit
GTGGTTGTTGTTTGTTTGTG12.0408163265306123No Hit
TTTTTTTGTTTTTTGTGTTT12.0408163265306123No Hit
GTTGTGGTCTGGTGGTTTGG12.0408163265306123No Hit
GTTGTGTGTTGGTTTTTGTG12.0408163265306123No Hit
GTTTTTGTAGTTGTTTGTTG12.0408163265306123No Hit
GTGGTTTTCTGTTGTTTTTG12.0408163265306123No Hit
GTGGGGTGGGTGTGGGTGGT12.0408163265306123No Hit
GTTTGTTTGTTTTTGTTTTT12.0408163265306123No Hit
GTGTGTTGTTTTGGTGTTTG12.0408163265306123No Hit
GTGGGGGGCTGGTGGTTTTG12.0408163265306123No Hit
GGTGTTTTGTGTTGGGTTTG12.0408163265306123No Hit
CGTTTGGGGTGTTGGTTTTT12.0408163265306123No Hit
GTCTTGGGAGTTTTGGTGTT12.0408163265306123No Hit
GGTTTTTGTTGTTTTTTTTT12.0408163265306123No Hit
GTGGTTTGCGGTTGGGTTTT12.0408163265306123No Hit
GGGTTGGTGTTGGGGTGTTT12.0408163265306123No Hit
GTTGTTGGGGGTTTTGGTTG12.0408163265306123No Hit
CGGGTTGGTGGTGGGGGTGT12.0408163265306123No Hit
GGCCTTTTGTTTTGGTTTTG12.0408163265306123No Hit
TTTGGTTGCTTTTCGTGTTG12.0408163265306123No Hit
GTGGGTGTAGGGGTTGTTGG12.0408163265306123No Hit
GGGGGGTGTGGGGGGTTGGT12.0408163265306123No Hit
GGGGTGGTGGGGTTTGTTGG12.0408163265306123No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)