FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr57.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr57.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length20
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTGGGGGTGTGTGTTTGG26.25No Hit
GTTTTTTTTGGTTGTTTTGT13.125No Hit
ATGGGGGGCGGTGTTGTGGG13.125No Hit
GGGGGGGTCGTTGGTGTGGT13.125No Hit
GGGTGTGTTGTGTTTTTGTG13.125No Hit
GGGTGGGTGGTTTTTTTGTG13.125No Hit
GGGGGTGGCTGGTGGTGGTT13.125No Hit
GCTCGGGGTTTTGGTTGGGG13.125No Hit
GGGTTGTGGTGTGGGTGGGG13.125No Hit
CGGTGTGTAGGTTGGTTGTT13.125No Hit
TTTGTTTGGTGTGTTGTTTT13.125No Hit
GTCTGTGGCGTTGTTGGTGG13.125No Hit
GGGTTGTGATGTGGGGGTTT13.125No Hit
CTGGTTTTCTTTGTTGGTTT13.125No Hit
GTGGTTTGCGTGGTTGGTGT13.125No Hit
GGGGGGGGCTGGGGGGGTGT13.125No Hit
GGTTGGGGTTGTGTTTGGTG13.125No Hit
GGTGGGTTGTGGTGGTGTGG13.125No Hit
GTGGTGTGGGGGGGTTTGTT13.125No Hit
GTGTTGTTTTGTTTTGTTGT13.125No Hit
GGTGTGTTGTGGTTGGGTGT13.125No Hit
GGGGGGTGGTTGGTTTGTGG13.125No Hit
TTTGTGTTCTGTGGTGGGTT13.125No Hit
GTGGTGTGGTGTGGGGGTGT13.125No Hit
GTGTGTGTTTGTGTTTTTTT13.125No Hit
GTTGTTTGTGTTTGTGTTTG13.125No Hit
GCCTTGTGCTGTGTGTGTGT13.125No Hit
GGTGTTGTCGGTGGTGTGTT13.125No Hit
GTTTTGTTTGTGGTGTGGGT13.125No Hit
GGGGGGTGCTGGTGGTGGGT13.125No Hit
GTGGTTGTGTGTGTGTGTGG13.125No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)