FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr44.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr44.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42
Sequences flagged as poor quality0
Sequence length20
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTGGTGATGTTTTTGTGT12.380952380952381No Hit
CTGGTGGGTTGTTTGGTTTT12.380952380952381No Hit
GTTCTGTGCGGTTTGGTGGT12.380952380952381No Hit
GGGGTGGTCTTTGGGTGGTT12.380952380952381No Hit
GTTGTGGTGTTTTTTTTGTT12.380952380952381No Hit
GTGGGGGGGGGTGGTTGGGG12.380952380952381No Hit
CGGGTGGTGTGGGGTTTTGG12.380952380952381No Hit
GGCTGGGGCGGGTTTGTGGG12.380952380952381No Hit
CGTGGTTGTGTTGGTGGGTG12.380952380952381No Hit
GCCCTTGTCGGGGGTGGGTT12.380952380952381No Hit
TGTGGTTTGTGTGGTGGGGT12.380952380952381No Hit
GTCCTTGTGTGGTGTGGTGT12.380952380952381No Hit
GTTGTGTTGTTGGGTTTGTT12.380952380952381No Hit
GTCCTGGGGGTGGGGGGTTG12.380952380952381No Hit
CCCCGTTTCGTTTTTTTTTG12.380952380952381No Hit
CTGGTTTGGTTTGTTTGGGG12.380952380952381No Hit
GCTGTGTGCGTTGGTGGGGG12.380952380952381No Hit
TGCTGGGGGGGGTGGGGGGG12.380952380952381No Hit
GGTGTTGTTGTTGGTTTTGG12.380952380952381No Hit
GGGTTTGGGTTTGGGTTTGG12.380952380952381No Hit
GTTTTTTTGGTGGTTTTTGG12.380952380952381No Hit
GCTTGGGTCGGTGTTGGGGT12.380952380952381No Hit
CTTCTTGGCTGTGGGTGGGT12.380952380952381No Hit
GTGTGTTGGTTGTTTGGTGT12.380952380952381No Hit
CTGGTGGGGTGTGGGTGTGG12.380952380952381No Hit
TCTCTTGGGTGTTTTGGGGG12.380952380952381No Hit
GTGTGGTGGTTGGGGGGTGT12.380952380952381No Hit
GGTGTGGTCTGGGTGTGTTT12.380952380952381No Hit
GGTGTGTTCTGTGGGGTGTT12.380952380952381No Hit
GCTCTTGGCTGGGTGTGGGT12.380952380952381No Hit
GGGGTTTTGGGTTGGGTTTT12.380952380952381No Hit
CCTCTGGTCGGTGTTGGTGG12.380952380952381No Hit
GCTCGGGTGTGGGTGTGGTT12.380952380952381No Hit
GTTGTGGTGTGTGGGTGGGG12.380952380952381No Hit
GGGGTTGGTTGGTGTGTGTG12.380952380952381No Hit
GTTTTTTGGTGGTTGTGGTG12.380952380952381No Hit
GGTGGGGGTGGTGGTGTTGT12.380952380952381No Hit
TTCTTGGTCTGGTTGGTGGG12.380952380952381No Hit
TGGTTTGTCGTGTTGTTTGT12.380952380952381No Hit
CTGGTTGTGTTGGGTGGGGT12.380952380952381No Hit
TGTTTTGGTGGTTTGGTGGG12.380952380952381No Hit
GGGTTGTTGGTGTTTGGGTG12.380952380952381No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)