FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr34.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr34.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length20
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGTGGGCGGGGGGGTGGG13.8461538461538463No Hit
TGGGGGTTGTTGTTTGTTGT13.8461538461538463No Hit
GGGGTTGTGTGTGGGGTTGT13.8461538461538463No Hit
GGTTGGTGGTGTGTGTGGTG13.8461538461538463No Hit
GGTGGGTGGGGTGTTGGGGT13.8461538461538463No Hit
GGTTGGTGTGTGTTGGGGTT13.8461538461538463No Hit
GTGGTTTTGTTTGGGTTTTT13.8461538461538463No Hit
GTGTTTTTGGTGTGGGGGGG13.8461538461538463No Hit
TTGTTGTTTGGTGGGGTGGG13.8461538461538463No Hit
TGGTTGTGGTGTTGTTTTTG13.8461538461538463No Hit
GTTTTGGGATGTGTTTGGGT13.8461538461538463No Hit
TTTTGTTTGTGTTGGGTTTG13.8461538461538463No Hit
GTGGTGTGGGTGGGTTGGTG13.8461538461538463No Hit
GCTATTGTATTGGGGGGGGT13.8461538461538463No Hit
GGGGTTTTTTGGTGTGGGGG13.8461538461538463No Hit
GTTTTGTTCTTTTTGTTTTT13.8461538461538463No Hit
ATGTTTTGTGGTGGGTGGGG13.8461538461538463No Hit
CGTTGTTGAGGGGTGGGGTT13.8461538461538463No Hit
GTTCTGTGGTTTGTGGTTGT13.8461538461538463No Hit
GGTGGTGGGTGTGGTGTGTG13.8461538461538463No Hit
GTGTTTGGCGTTGGGTTTTG13.8461538461538463No Hit
GGTGTGTTCTGGGTTTGGTT13.8461538461538463No Hit
TTTTGTGGGTGGTGGGGGGT13.8461538461538463No Hit
GGTGGGTTGTGGTTTGGGTT13.8461538461538463No Hit
GGGGTGTGCTGGGTTGGTGT13.8461538461538463No Hit
GGTTTGTTTTGGGGTTGTTG13.8461538461538463No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)