FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr23.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr23.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length20
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGGTTATGGTGTTTTTG14.3478260869565215No Hit
TGTGGTGGCTGGGTTGTGTG14.3478260869565215No Hit
GGGTGTTTAGGTGGGGTTTT14.3478260869565215No Hit
CTTGTGTGTTTTTGGGTTGT14.3478260869565215No Hit
GTGGTGTGGTTGGGGGTGTG14.3478260869565215No Hit
GGCGTTGGTTTTTTTTTTGT14.3478260869565215No Hit
GTTTGTGTCTTGGTTGTTGT14.3478260869565215No Hit
GGGTTGTTTTTTGTTTGTTG14.3478260869565215No Hit
GTTGGGTTTTGTTTTGTGGG14.3478260869565215No Hit
GTTTGTGTGTTTTGTTTGTT14.3478260869565215No Hit
TTTGTTTGCTTGGGTGGGGT14.3478260869565215No Hit
TGGTGGTTTTTGGGGTGTTT14.3478260869565215No Hit
TCCTGGTGGTGTGGTGTGTT14.3478260869565215No Hit
GCTCTGTGCGTTGTGTGGGG14.3478260869565215No Hit
AGTGTTTGTTGTTGTTGTGT14.3478260869565215No Hit
GGTGGGTTGGGTTTGGTTGT14.3478260869565215No Hit
CTGTGTGTGTGTGTGGGTGG14.3478260869565215No Hit
TGTGGGTTTTGGGTTGGGGG14.3478260869565215No Hit
GGTGGGGGTGGGGTTGGGTT14.3478260869565215No Hit
TGTCTGGTGTTGGGGTTGTG14.3478260869565215No Hit
GTGTGTGGATGTGGTGTGTT14.3478260869565215No Hit
TGTGGTTTCTGGTTTGGTTT14.3478260869565215No Hit
CTTTTGGGCGTGGGGGTCGG14.3478260869565215No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)