FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences189
Sequences flagged as poor quality0
Sequence length20
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCTGTGGGTTTTTTGTGT10.5291005291005291No Hit
GTGTTTGTGTTGGGTTTGTG10.5291005291005291No Hit
GTTGGTTGGTTGGGTTTTGG10.5291005291005291No Hit
GTTTTTTTTGTTTTGTTTGG10.5291005291005291No Hit
GTTGTGGGGGTTGTGGGTTG10.5291005291005291No Hit
GGTTTTTGTGGGGTTGGTGT10.5291005291005291No Hit
TGTTTGTGGTGTTGTGTTTT10.5291005291005291No Hit
GTTCTGGGGTTTTGTTTTGG10.5291005291005291No Hit
GGGTTGGTGGGTGTTGGTTG10.5291005291005291No Hit
GTTGGGTGGGTTTGTGTGTG10.5291005291005291No Hit
GTTGTTGGTTTGTGTTGTGG10.5291005291005291No Hit
ATTTTTGTTTTGGTTTTTTG10.5291005291005291No Hit
GGTTTGTTCGTTTTGGTTTT10.5291005291005291No Hit
GGGTTGTTATGGTTTTTTTT10.5291005291005291No Hit
GGTCTTGGCGGTGGGGTGGT10.5291005291005291No Hit
TTGTTTGGGTTTTGGGTGGT10.5291005291005291No Hit
GGTTGTTTTGGGGGTTTTGG10.5291005291005291No Hit
TTTTTTTTGTGGGTGTTGGT10.5291005291005291No Hit
GGTTTTTTGTGGTTTTTGGG10.5291005291005291No Hit
CTTTTTGTCGTTGTTGGGTT10.5291005291005291No Hit
GTTTTGGTGTGGTTGTTTGT10.5291005291005291No Hit
GTTGTGGGTTTGTTTGTTTG10.5291005291005291No Hit
TGTGTTTGTTGTTGTGGGTT10.5291005291005291No Hit
TCCCTTGTTTGTGTGGGTGT10.5291005291005291No Hit
GGGTTGTGGTGGTGTGGTTT10.5291005291005291No Hit
GGGTTGTTATTTTTGTTTGG10.5291005291005291No Hit
GTTTTTGTGTGTTGGGTGTT10.5291005291005291No Hit
GGTGTTGGTTTTGGTTTTTG10.5291005291005291No Hit
CGTTTGTTCTGGTGGGTTTG10.5291005291005291No Hit
GCCCTGTGAGTTTTTTGTTG10.5291005291005291No Hit
TTGGTTGGGTTGTGTGTTTG10.5291005291005291No Hit
GTGTTTGTGTGTGGGTGTTT10.5291005291005291No Hit
GGTTTGTGGTGTGTTGTTTG10.5291005291005291No Hit
TTTCTGTTTGTTGTTGTTGG10.5291005291005291No Hit
CTTTTTGGATTTGGTTGTTG10.5291005291005291No Hit
CTTTTGTTGGGGTGTTTGGG10.5291005291005291No Hit
GGTGGGGGTGTGGGGGGGGG10.5291005291005291No Hit
GTGTTTGTGTGGGTGTGTTT10.5291005291005291No Hit
GGGTGTTTCTTTGGTGTTGT10.5291005291005291No Hit
CCCTGTTTCTTTGGGGTGGG10.5291005291005291No Hit
GGTGGGGGGGGGGGGGGGTG10.5291005291005291No Hit
CGTTTGTTGTGGTGTGTTTT10.5291005291005291No Hit
GTGCGTTTAGGTGTGTTGGT10.5291005291005291No Hit
CTTGTGTGGGTTTGGGTGTT10.5291005291005291No Hit
GGGGTGTGAGGGTGTGGTTG10.5291005291005291No Hit
GTTTTTTGGTGTGGGTTTTT10.5291005291005291No Hit
CCTCTTGGATTGTGTGGTTT10.5291005291005291No Hit
GTTCTGTTTTTGGGTTTGTT10.5291005291005291No Hit
TTCCTGTGGGTTTGTTGTGT10.5291005291005291No Hit
TGTGTTGGGTTTTGGTGGTT10.5291005291005291No Hit
CGTTGTGGGGGGGGGGGGGG10.5291005291005291No Hit
GTGGGTGGGTTGGGGTTTGT10.5291005291005291No Hit
TTGTTTGTGGGTGGGTGTGT10.5291005291005291No Hit
GTTGTTGTTTGTGGGGGGTG10.5291005291005291No Hit
GGTTGGGGGGGGGTTTGGGG10.5291005291005291No Hit
TTTGTTGTGTGGTTTTGGTT10.5291005291005291No Hit
GGTGGTTGATGTGGGGGGGT10.5291005291005291No Hit
CTGTTTGTTGTGGTGTTTTT10.5291005291005291No Hit
TTGGTTGTCTGGGGTTGGGG10.5291005291005291No Hit
GTTTGTGGCTTGGGGTTGGT10.5291005291005291No Hit
CGGTGGGTGTGTTTGTGTTT10.5291005291005291No Hit
GGTTTTTGCTGTTGTTTTTT10.5291005291005291No Hit
TTGGTGTTGTTGGGTTTTTT10.5291005291005291No Hit
GTGTTGGTCGTGGTTTTTGG10.5291005291005291No Hit
TGTTTTTGGTTTGTTTGTTT10.5291005291005291No Hit
GTTGTGTTATTTGGTGTTGG10.5291005291005291No Hit
GGTGTGTTTTTTTGGGGTTG10.5291005291005291No Hit
AGTGTTTTGTGTTGTTGGTG10.5291005291005291No Hit
TGTGTTGGCTGGGGGTGTGG10.5291005291005291No Hit
GGGCGGGGGTGGGTTTTTTG10.5291005291005291No Hit
AGGGTTGTGTTTGTGTGTTG10.5291005291005291No Hit
GGGTTGTTATTTGTGGTTGT10.5291005291005291No Hit
GTGGTTGGGTTTGTGGGGTG10.5291005291005291No Hit
GGGGTTGGCTTGGGGTGGTG10.5291005291005291No Hit
GTTGTTTTTTTGTTTTTTTG10.5291005291005291No Hit
GGTTTTGGTGTGGTTTTTGT10.5291005291005291No Hit
TTTTTTTCCGTTTGGTTTTT10.5291005291005291No Hit
CTTGTTGGGTGTGTGTTGTG10.5291005291005291No Hit
TCTCTGTGGGGGTGTTGTTT10.5291005291005291No Hit
CTCCTTTTGGTGTTGTTGTG10.5291005291005291No Hit
GTGGTGGGCGTGTGGGTGTT10.5291005291005291No Hit
GGGGGGTGAGTTGGTGTTTT10.5291005291005291No Hit
GGTGTTGTTTTTTTTGTGGT10.5291005291005291No Hit
GTGGTTGTTTTTGGTTGTGG10.5291005291005291No Hit
GGGTTTTGCTGGTTGGTTTT10.5291005291005291No Hit
CTTGTTTGTGGGGTTGTTTT10.5291005291005291No Hit
CTTGGGGTCGGGGTGTGTGG10.5291005291005291No Hit
ATTTTGTGTCCATTAAGTGG10.5291005291005291No Hit
GTTTGTTTCTTTTTGTTTTT10.5291005291005291No Hit
TTGTTTTTGGTTGTTGTGTG10.5291005291005291No Hit
ATGTTTGTTTTGTTTGTTTG10.5291005291005291No Hit
GTGTTTTTTTGTGGTTTTTG10.5291005291005291No Hit
TTTCTGTTGTGGTGGGGGGG10.5291005291005291No Hit
TTCCTGTTCTGTGGGGGTTG10.5291005291005291No Hit
GTTTTTGTCTTTTGGGGGGT10.5291005291005291No Hit
TTGGTTGGCTTTTGTTTGTT10.5291005291005291No Hit
GGTTTGGTGTTTTTGGGTGG10.5291005291005291No Hit
TGTTGGGGCGTTTTTTGTGT10.5291005291005291No Hit
CTGGGGTGGGGTTTTTGTGG10.5291005291005291No Hit
TTTTGGGTTTGGGGGTGTTT10.5291005291005291No Hit
GTGGTGTTGGGGTTTGGGTG10.5291005291005291No Hit
GGTTTTTTGGGGTGGTTGGT10.5291005291005291No Hit
GGTTTGGTATGTGTTTTTGT10.5291005291005291No Hit
GTTTTTTTCTTTTTTTTTTT10.5291005291005291No Hit
GTGTTTGTGGTGTTTTTTTT10.5291005291005291No Hit
GGTTTGGGGTTTGTGGTTGT10.5291005291005291No Hit
GTGTTGTTTTTTGTGTGGTG10.5291005291005291No Hit
GGTTTTGTGGGGGGGTGGGT10.5291005291005291No Hit
GTGTTGGTGTTTTTGTGGGG10.5291005291005291No Hit
GTTTTTTTGGTTGTTGGTTT10.5291005291005291No Hit
GGGGGTGTGGTGGGGTGTTT10.5291005291005291No Hit
TGTTTTTTCTGTGGTGTTTT10.5291005291005291No Hit
GGTTTTGGGGGTGGTGGGGT10.5291005291005291No Hit
GTGTGTGGGGTTTGTTGTTG10.5291005291005291No Hit
GGTGTTTGGTGTTGGGGTTT10.5291005291005291No Hit
TTGTTTTTTTTTGTTTGTTT10.5291005291005291No Hit
GTTCGTTTATGGGGGTTGTT10.5291005291005291No Hit
GTTTGTTGGTTTGTGGTTTT10.5291005291005291No Hit
AGTGTTGTCGGTGTTTTTTT10.5291005291005291No Hit
GTTTTGTTCGTTGTTTGTGG10.5291005291005291No Hit
GGTTTGGGCGGGTTGTGGGG10.5291005291005291No Hit
GGCTTTGTCTTTGGGTTTTG10.5291005291005291No Hit
AGTTTGTGTTGTTGTGGGGG10.5291005291005291No Hit
GTTTGGGTCGGGTGTGTGTG10.5291005291005291No Hit
GTGTTTTGCTGGTTGGTTGT10.5291005291005291No Hit
GGTTGGGTCGGGTTGGGTGT10.5291005291005291No Hit
GTTTTTTGATGGTTTTTTTT10.5291005291005291No Hit
GTTGTTTGGTGTGTGTGTGG10.5291005291005291No Hit
TTCCTGTTCTGTTGTGGTTT10.5291005291005291No Hit
GTGTTTGTGTTGGTTTGTTG10.5291005291005291No Hit
CGTTTTTTGTGATTTTGGTT10.5291005291005291No Hit
GTGTTTTGCTTTGTTGTTTG10.5291005291005291No Hit
GTGTTGTTTTTGTTGTTTGT10.5291005291005291No Hit
TGTGTGTTGTTTTTTGGGTT10.5291005291005291No Hit
GTGGTGGTTGGGGTTGGGGG10.5291005291005291No Hit
GGTGTTTGAGTGTGTGTTGT10.5291005291005291No Hit
GGCGTTGGCTGTTGGTGTTT10.5291005291005291No Hit
TTTGTGGTCTTGTGGGGTTG10.5291005291005291No Hit
TGTTTTGGGTATTGTTGTTG10.5291005291005291No Hit
GGGTGTGTGTGTTGTTTGTT10.5291005291005291No Hit
TGTTTTTTATGGGTGTGTTT10.5291005291005291No Hit
CTGCGGTGCGTGTGGTTGGT10.5291005291005291No Hit
GGGTTTTGCTTTTTGGTTGT10.5291005291005291No Hit
TTTCGTGGTGGTTGTGTGTG10.5291005291005291No Hit
GTTTTGGGGGTGGGGTTTGG10.5291005291005291No Hit
GGTTGTTGCGTGGTGGGGTT10.5291005291005291No Hit
GTGTTTTGCGTTTTGTGTGT10.5291005291005291No Hit
GGGGTTGTCGTGGTTTTTGG10.5291005291005291No Hit
GGTGTGGGCGGTTGGTGGTG10.5291005291005291No Hit
GGGGTTTGCTGGGTGGGTTT10.5291005291005291No Hit
GTTTTTTTCTTTGGGTTTGT10.5291005291005291No Hit
TCTCGGTTTTTTTGGGGTGT10.5291005291005291No Hit
GGGGTGTGCTGTGGGTGTGG10.5291005291005291No Hit
GTTGTGTTGTGGGGGTTGTT10.5291005291005291No Hit
GGTCTGGTATTTGTTGTTTT10.5291005291005291No Hit
TGTGGTTGGTGTTTTTGGTT10.5291005291005291No Hit
GTGTGGGGGTTTGTGTTTTT10.5291005291005291No Hit
GTGTTTTGGTTGGGGGGTTG10.5291005291005291No Hit
GTTTGTTTCTTTTTTGTTGG10.5291005291005291No Hit
TTTTTTTTGTGGTTTTGTTT10.5291005291005291No Hit
TTGGTTGGCTGGTGGTGTGT10.5291005291005291No Hit
GGGTGTGGGGTTGGGGGGGG10.5291005291005291No Hit
GTGCTGGTATGGGGTTTGTG10.5291005291005291No Hit
GGTGTGTTCTTGGTGGTTTT10.5291005291005291No Hit
TGCTGGGTGTGTTGGTTGGG10.5291005291005291No Hit
GTGTTTTGGTTTTGGTGGGT10.5291005291005291No Hit
GTGTTGTTTTGGTCTGTGGT10.5291005291005291No Hit
AGGTTGTGGTTGGTGGGTTT10.5291005291005291No Hit
GGGTTTTTGTGGGTTGTTGT10.5291005291005291No Hit
CGGTTTTTCGGGGTGGTTGG10.5291005291005291No Hit
GTTTTTTTTTTTGTTGGGTT10.5291005291005291No Hit
GTGTTTGTCTGTTTGTTTGT10.5291005291005291No Hit
GTGCTGGGCTTGGTTTTTTT10.5291005291005291No Hit
TGTGGTTTGTGTTTTTTTGG10.5291005291005291No Hit
GTTTTTGTTTGTTTTTTTTT10.5291005291005291No Hit
CGTTGGTTCTTGTTTGTTTG10.5291005291005291No Hit
GTTCGGGGCGTTGGTGTTTG10.5291005291005291No Hit
TGGGTTTGCTGGGGGTTGGG10.5291005291005291No Hit
GTGGTTTTCTTTTGGTTTGT10.5291005291005291No Hit
CGGTGGGTGGTTGGTTTTGG10.5291005291005291No Hit
CTCTTTTTTTGTGGTTTGTG10.5291005291005291No Hit
GTTGTTGGTGGTGTGTGGTT10.5291005291005291No Hit
GTTGTGGTGGGGTTTGGTTT10.5291005291005291No Hit
GTGTTTTTTTTTTTTGTGGT10.5291005291005291No Hit
TTCTTTTTCTTTGGTTTTTG10.5291005291005291No Hit
GTTTGGGGTGTGGTTTGGGT10.5291005291005291No Hit
GTGTTTGGCTGGGCTTTGTT10.5291005291005291No Hit
TTGTTTGGGTGTGGGTTTTT10.5291005291005291No Hit
TTCCTTGTCGTTGTGTGGTG10.5291005291005291No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers