FastQCFastQC Report
Mon 16 Mar 2020
HKVH7DRXX_n01_dpr11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKVH7DRXX_n01_dpr11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length20
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGTTTTGTTTTGGGGGTT16.25No Hit
TGGGTTGGCTTTGGTGTGTT16.25No Hit
TTGTTGGTCGTGTGGGTGTT16.25No Hit
CTCCTGGGTGGTGTGGGGGT16.25No Hit
TGGTTTGGAGGTTGTTGGTG16.25No Hit
GCCTTTTTAGGTTTGGGTTT16.25No Hit
GTGGTTGTGTGTGTTGGTTG16.25No Hit
TTTTGGTTTTTTTTGTGTTT16.25No Hit
GGGTTTTTCGTGGTGGTTGT16.25No Hit
GTGGTGGTGTGTTGTGGGTG16.25No Hit
CTGGTGTGAGGTGGGGTGGG16.25No Hit
GTTTGGTGTTGTGTTTGTGG16.25No Hit
GGTGTGTGTTGTGTGTGTGT16.25No Hit
GGGGGTGGGGGGGTGGGTGG16.25No Hit
GCTCTGTTGTGGGTTGGGGG16.25No Hit
TTGTTTGTCTTTGTTTGTTT16.25No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)