HKVGTAFX2_n02_vk11-20.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKVGTAFX2_n02_vk11-20.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4237930
Sequences flagged as poor quality	0
Sequence length	76
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16060	0.37895859535197607	No Hit
TGGGGTGGTATAGTCCGCATTGGGATGTTACTTTCCTGTTATGGCATGGA	4486	0.10585356530192806	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGGATC	5005	41.873753	55
CGGATCA	5120	40.662285	56
TCTCGGG	3305	40.553032	43
CTCGGGG	3465	40.49786	44
AAAGGGG	21965	39.775127	70
GCCGGAT	6080	39.303955	54
CGCCGGA	5595	38.958935	53
GATCGCG	1985	38.43237	41
ATCGCGG	2000	38.3191	42
GGGTCGC	3875	38.287712	49
GTCGCCG	21510	37.900047	51
CGCCGTA	14100	37.76719	53
ATCTCGG	21050	37.75428	42
GATCTCG	20830	37.716225	41
CCGTATC	13780	37.653996	55
AGATCTC	20570	37.56349	40
TCGCCGT	14545	37.54986	52
TCGCCGG	7125	37.516956	52
CGTATCA	13960	37.145615	56
AAGGGGG	9885	37.059048	70