Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
HKTVNAFX3_n01_10676-hop1	HKTVNAFX3_n01_10676-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8295563.0	0.0	151.0	42.0	74.03711299301801	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	warn
HKTVNAFX3_n01_10676-in	HKTVNAFX3_n01_10676-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6547818.0	0.0	151.0	38.0	80.77285830422186	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n01_10676spikein-hop1	HKTVNAFX3_n01_10676spikein-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6920635.0	0.0	151.0	40.0	77.65092684857946	151.0	pass	pass	pass	pass	pass	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n01_10676spikein-in	HKTVNAFX3_n01_10676spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14883345.0	0.0	151.0	48.0	65.94619941639911	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
HKTVNAFX3_n01_10677-hop1	HKTVNAFX3_n01_10677-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7692446.0	0.0	151.0	40.0	79.51532688931586	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n01_10677spikein-in	HKTVNAFX3_n01_10677spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8050048.0	0.0	151.0	40.0	78.7980081188349	151.0	pass	pass	pass	pass	pass	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n01_10677spikin-hop1	HKTVNAFX3_n01_10677spikin-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8222854.0	0.0	151.0	39.0	78.24151567745427	151.0	pass	pass	pass	pass	warn	pass	pass	pass	pass	pass	fail
HKTVNAFX3_n01_10962in	HKTVNAFX3_n01_10962in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7621272.0	0.0	151.0	38.0	79.86596735202079	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	pass	warn
HKTVNAFX3_n01_10962red1	HKTVNAFX3_n01_10962red1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4748381.0	0.0	151.0	41.0	76.41294448008622	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	pass
HKTVNAFX3_n01_11644hop1	HKTVNAFX3_n01_11644hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8527537.0	0.0	151.0	39.0	74.34900993660123	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	fail	warn
HKTVNAFX3_n01_11644in	HKTVNAFX3_n01_11644in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8191010.0	0.0	151.0	40.0	78.0138668905632	151.0	pass	pass	pass	pass	pass	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n01_11689hop1	HKTVNAFX3_n01_11689hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5948331.0	0.0	151.0	39.0	81.3033565987713	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n01_11689in	HKTVNAFX3_n01_11689in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8577053.0	0.0	151.0	38.0	79.12980967067543	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n01_7797-hop1-sm	HKTVNAFX3_n01_7797-hop1-sm.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7569826.0	0.0	151.0	39.0	78.20974413074276	151.0	pass	pass	pass	pass	warn	pass	pass	pass	pass	pass	fail
HKTVNAFX3_n01_7797-in-sm	HKTVNAFX3_n01_7797-in-sm.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23547935.0	0.0	151.0	46.0	58.732010505026665	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
HKTVNAFX3_n01_7797hop1-phd	HKTVNAFX3_n01_7797hop1-phd.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2542093.0	0.0	151.0	40.0	88.84090660981833	151.0	pass	pass	pass	pass	pass	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n01_7797in-phd	HKTVNAFX3_n01_7797in-phd.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8789316.0	0.0	151.0	38.0	78.33523344093061	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n01_7797spikein-hop1	HKTVNAFX3_n01_7797spikein-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7257010.0	0.0	151.0	38.0	76.98786491962179	151.0	pass	pass	pass	pass	warn	pass	pass	pass	pass	pass	fail
HKTVNAFX3_n01_7797spikein-in	HKTVNAFX3_n01_7797spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8921356.0	0.0	151.0	38.0	74.72288680539367	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	pass	fail
HKTVNAFX3_n01_undetermined	HKTVNAFX3_n01_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5641766.0	0.0	151.0	44.0	85.77114065248486	151.0	pass	pass	pass	pass	fail	fail	pass	pass	pass	pass	warn
HKTVNAFX3_n02_10676-hop1	HKTVNAFX3_n02_10676-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8295563.0	0.0	151.0	44.0	74.74018300308097	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	warn
HKTVNAFX3_n02_10676-in	HKTVNAFX3_n02_10676-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6547818.0	0.0	151.0	38.0	81.61612240133441	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n02_10676spikein-hop1	HKTVNAFX3_n02_10676spikein-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6920635.0	0.0	151.0	42.0	78.86862148258206	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	fail
HKTVNAFX3_n02_10676spikein-in	HKTVNAFX3_n02_10676spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14883345.0	0.0	151.0	51.0	65.64056433359997	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
HKTVNAFX3_n02_10677-hop1	HKTVNAFX3_n02_10677-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7692446.0	0.0	151.0	41.0	78.78176412287587	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	fail
HKTVNAFX3_n02_10677spikein-in	HKTVNAFX3_n02_10677spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8050048.0	0.0	151.0	40.0	78.48434855173328	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	fail
HKTVNAFX3_n02_10677spikin-hop1	HKTVNAFX3_n02_10677spikin-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8222854.0	0.0	151.0	39.0	77.94689742323068	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n02_10962in	HKTVNAFX3_n02_10962in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7621272.0	0.0	151.0	38.0	79.95104037017762	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n02_10962red1	HKTVNAFX3_n02_10962red1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4748381.0	0.0	151.0	41.0	77.92814654859771	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	pass
HKTVNAFX3_n02_11644hop1	HKTVNAFX3_n02_11644hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8527537.0	0.0	151.0	40.0	74.11685371114646	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	warn
HKTVNAFX3_n02_11644in	HKTVNAFX3_n02_11644in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8191010.0	0.0	151.0	40.0	78.48236687739384	151.0	pass	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn
HKTVNAFX3_n02_11689hop1	HKTVNAFX3_n02_11689hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5948331.0	0.0	151.0	40.0	85.45273299383997	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	pass
HKTVNAFX3_n02_11689in	HKTVNAFX3_n02_11689in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8577053.0	0.0	151.0	39.0	79.55556673189005	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	warn	fail
HKTVNAFX3_n02_7797-hop1-sm	HKTVNAFX3_n02_7797-hop1-sm.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7569826.0	0.0	151.0	40.0	77.84112806301141	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n02_7797-in-sm	HKTVNAFX3_n02_7797-in-sm.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	23547935.0	0.0	151.0	49.0	60.530701353167196	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
HKTVNAFX3_n02_7797hop1-phd	HKTVNAFX3_n02_7797hop1-phd.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2542093.0	0.0	151.0	40.0	89.25919063929067	151.0	pass	pass	pass	pass	warn	fail	pass	pass	pass	fail	warn
HKTVNAFX3_n02_7797in-phd	HKTVNAFX3_n02_7797in-phd.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8789316.0	0.0	151.0	39.0	78.13307510980026	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	warn
HKTVNAFX3_n02_7797spikein-hop1	HKTVNAFX3_n02_7797spikein-hop1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7257010.0	0.0	151.0	38.0	76.91559549972136	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n02_7797spikein-in	HKTVNAFX3_n02_7797spikein-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8921356.0	0.0	151.0	38.0	76.38563048926225	151.0	pass	pass	pass	pass	warn	warn	pass	pass	pass	warn	fail
HKTVNAFX3_n02_undetermined	HKTVNAFX3_n02_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5641766.0	0.0	151.0	47.0	78.13479126727788	151.0	pass	warn	pass	fail	fail	fail	pass	pass	pass	fail	warn