[2022-12-21 10:21:11,146] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2022-12-21 10:21:11,146] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2022-12-21 10:21:11,146] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2022-12-21 10:21:11,147] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2022-12-21 10:21:11,147] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}} [2022-12-21 10:21:11,147] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HKTM3DRX2/1 [2022-12-21 10:21:11,669] multiqc [WARNING] MultiQC Version v1.13 now available! [2022-12-21 10:21:11,669] multiqc [INFO ] This is MultiQC v1.9 [2022-12-21 10:21:11,669] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HKTM3DRX2/1 [2022-12-21 10:21:11,669] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HKTM3DRX2/1 [2022-12-21 10:21:11,669] multiqc [INFO ] Template : default [2022-12-21 10:21:11,669] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2022-12-21 10:21:11,669] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HKTM3DRX2/1 [2022-12-21 10:21:11,669] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2022-12-21 10:21:11,670] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-28504443/tmp2hza5z0o [2022-12-21 10:21:11,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_H9_b_fastqc.html [2022-12-21 10:21:11,804] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_H9_b_fastqc.html [2022-12-21 10:21:11,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_F9_b_fastqc.html [2022-12-21 10:21:11,879] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_F9_b_fastqc.html [2022-12-21 10:21:11,949] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C10_b_fastqc.html [2022-12-21 10:21:11,951] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C10_b_fastqc.html [2022-12-21 10:21:12,020] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_undetermined_fastqc.html [2022-12-21 10:21:12,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_undetermined_fastqc.html [2022-12-21 10:21:12,079] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,081] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A10_b_fastqc.html [2022-12-21 10:21:12,145] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_E6_b_fastqc.html [2022-12-21 10:21:12,147] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_E6_b_fastqc.html [2022-12-21 10:21:12,215] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,217] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_C6_b_fastqc.html [2022-12-21 10:21:12,283] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_B9_b_fastqc.html [2022-12-21 10:21:12,285] multiqc [DEBUG ] File ignored by 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[DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_A10_b_fastqc.html [2022-12-21 10:21:12,566] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_A10_b_fastqc.html [2022-12-21 10:21:12,637] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_E10_b_fastqc.html [2022-12-21 10:21:12,639] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_E10_b_fastqc.html [2022-12-21 10:21:12,708] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_undetermined_fastqc.html [2022-12-21 10:21:12,710] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_undetermined_fastqc.html [2022-12-21 10:21:12,768] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_D9_b_fastqc.html [2022-12-21 10:21:12,770] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_D9_b_fastqc.html [2022-12-21 10:21:12,840] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,842] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_C6_b_fastqc.html [2022-12-21 10:21:12,907] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_G6_b_fastqc.html [2022-12-21 10:21:12,908] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_G6_b_fastqc.html [2022-12-21 10:21:12,979] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:12,981] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_G6_b_fastqc.html [2022-12-21 10:21:13,046] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_E6_b_fastqc.html [2022-12-21 10:21:13,048] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_E6_b_fastqc.html [2022-12-21 10:21:13,117] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_B9_b_fastqc.html [2022-12-21 10:21:13,119] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_B9_b_fastqc.html [2022-12-21 10:21:13,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_A6_b_fastqc.html [2022-12-21 10:21:13,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n01_T16_A6_b_fastqc.html [2022-12-21 10:21:13,258] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,260] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_A6_b_fastqc.html [2022-12-21 10:21:13,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_H9_b_fastqc.html [2022-12-21 10:21:13,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_H9_b_fastqc.html [2022-12-21 10:21:13,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_D9_b_fastqc.html [2022-12-21 10:21:13,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HKTM3DRX2_l01_n02_T16_D9_b_fastqc.html [2022-12-21 10:21:13,806] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2022-12-21 10:21:13,808] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2022-12-21 10:21:13,817] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2022-12-21 10:21:13,823] multiqc.modules.custom_content.custom_content [INFO ] demux_report-1: Found 12 samples (table) [2022-12-21 10:21:13,833] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2022-12-21 10:21:13,841] multiqc [DEBUG ] No samples found: conpair [2022-12-21 10:21:13,849] multiqc [DEBUG ] No samples found: peddy [2022-12-21 10:21:13,861] multiqc [DEBUG ] No samples found: somalier [2022-12-21 10:21:13,871] multiqc [DEBUG ] No samples found: methylQA [2022-12-21 10:21:13,894] multiqc [DEBUG ] No samples found: mosdepth [2022-12-21 10:21:13,902] multiqc [DEBUG ] No samples found: phantompeakqualtools [2022-12-21 10:21:13,907] multiqc [DEBUG ] No samples found: qualimap [2022-12-21 10:21:13,918] multiqc [DEBUG ] No samples found: preseq [2022-12-21 10:21:13,927] multiqc [DEBUG ] No samples found: quast [2022-12-21 10:21:13,945] multiqc [DEBUG ] No samples found: qorts [2022-12-21 10:21:13,953] multiqc [DEBUG ] No samples found: rna_seqc [2022-12-21 10:21:13,961] multiqc [DEBUG ] No samples found: rockhopper [2022-12-21 10:21:13,971] multiqc [DEBUG ] No samples found: rsem [2022-12-21 10:21:13,997] multiqc [DEBUG ] No samples found: rseqc [2022-12-21 10:21:14,004] multiqc [DEBUG ] No samples found: busco [2022-12-21 10:21:14,013] multiqc [DEBUG ] No samples found: goleft_indexcov [2022-12-21 10:21:14,023] multiqc [DEBUG ] No samples found: disambiguate [2022-12-21 10:21:14,035] multiqc [DEBUG ] No samples found: supernova [2022-12-21 10:21:14,061] multiqc [DEBUG ] No samples found: deeptools [2022-12-21 10:21:14,071] multiqc [DEBUG ] No samples found: sargasso [2022-12-21 10:21:14,076] multiqc [DEBUG ] No samples found: verifybamid [2022-12-21 10:21:14,083] multiqc [DEBUG ] No samples found: mirtrace [2022-12-21 10:21:14,087] multiqc [DEBUG ] No samples found: happy [2022-12-21 10:21:14,094] multiqc [DEBUG ] No samples found: mirtop [2022-12-21 10:21:14,102] multiqc [DEBUG ] No samples found: homer [2022-12-21 10:21:14,107] multiqc [DEBUG ] No samples found: macs2 [2022-12-21 10:21:14,112] multiqc [DEBUG ] No samples found: theta2 [2022-12-21 10:21:14,119] multiqc [DEBUG ] No samples found: snpeff [2022-12-21 10:21:14,126] multiqc [DEBUG ] No samples found: gatk [2022-12-21 10:21:14,131] multiqc [DEBUG ] No samples found: htseq [2022-12-21 10:21:14,140] multiqc [DEBUG ] No samples found: bcftools [2022-12-21 10:21:14,152] multiqc [DEBUG ] No samples found: featureCounts [2022-12-21 10:21:14,170] multiqc [DEBUG ] No samples found: fgbio [2022-12-21 10:21:14,201] multiqc [DEBUG ] No samples found: dragen [2022-12-21 10:21:14,210] multiqc [DEBUG ] No samples found: dedup [2022-12-21 10:21:14,220] multiqc [DEBUG ] No samples found: damageprofiler [2022-12-21 10:21:14,291] multiqc [DEBUG ] No samples found: biobambam2 [2022-12-21 10:21:14,307] multiqc [DEBUG ] No samples found: mtnucratio [2022-12-21 10:21:14,309] multiqc [DEBUG ] No samples found: picard [2022-12-21 10:21:14,316] multiqc [DEBUG ] No samples found: prokka [2022-12-21 10:21:14,332] multiqc [DEBUG ] No samples found: samblaster [2022-12-21 10:21:14,352] multiqc [DEBUG ] No samples found: samtools [2022-12-21 10:21:14,361] multiqc [DEBUG ] No samples found: sexdeterrmine [2022-12-21 10:21:14,371] multiqc [DEBUG ] No samples found: bamtools [2022-12-21 10:21:14,378] multiqc [DEBUG ] No samples found: jellyfish [2022-12-21 10:21:14,411] multiqc [DEBUG ] No samples found: vcftools [2022-12-21 10:21:14,429] multiqc [DEBUG ] No samples found: longranger [2022-12-21 10:21:14,438] multiqc [DEBUG ] No samples found: stacks [2022-12-21 10:21:14,450] multiqc [DEBUG ] No samples found: varscan2 [2022-12-21 10:21:14,512] multiqc [DEBUG ] No samples found: bbmap [2022-12-21 10:21:14,530] multiqc [DEBUG ] No samples found: bismark [2022-12-21 10:21:14,551] multiqc [DEBUG ] No samples found: biscuit [2022-12-21 10:21:14,569] multiqc [DEBUG ] No samples found: hicexplorer [2022-12-21 10:21:14,581] multiqc [DEBUG ] No samples found: hicup [2022-12-21 10:21:14,596] multiqc [DEBUG ] No samples found: hicpro [2022-12-21 10:21:14,614] multiqc [DEBUG ] No samples found: salmon [2022-12-21 10:21:14,626] multiqc [DEBUG ] No samples found: kallisto [2022-12-21 10:21:14,634] multiqc [DEBUG ] No samples found: slamdunk [2022-12-21 10:21:14,654] multiqc [DEBUG ] No samples found: star [2022-12-21 10:21:14,667] multiqc [DEBUG ] No samples found: hisat2 [2022-12-21 10:21:14,681] multiqc [DEBUG ] No samples found: tophat [2022-12-21 10:21:14,693] multiqc [DEBUG ] No samples found: bowtie2 [2022-12-21 10:21:14,708] multiqc [DEBUG ] No samples found: bowtie1 [2022-12-21 10:21:14,732] multiqc [DEBUG ] No samples found: snpsplit [2022-12-21 10:21:14,747] multiqc [DEBUG ] No samples found: kat [2022-12-21 10:21:14,762] multiqc [DEBUG ] No samples found: leehom [2022-12-21 10:21:14,780] multiqc [DEBUG ] No samples found: adapterRemoval [2022-12-21 10:21:14,794] multiqc [DEBUG ] No samples found: clipandmerge [2022-12-21 10:21:14,811] multiqc [DEBUG ] No samples found: cutadapt [2022-12-21 10:21:14,821] multiqc [DEBUG ] No samples found: flexbar [2022-12-21 10:21:14,829] multiqc [DEBUG ] No samples found: kaiju [2022-12-21 10:21:14,850] multiqc [DEBUG ] No samples found: kraken [2022-12-21 10:21:14,874] multiqc [DEBUG ] No samples found: malt [2022-12-21 10:21:14,897] multiqc [DEBUG ] No samples found: trimmomatic [2022-12-21 10:21:14,920] multiqc [DEBUG ] No samples found: sickle [2022-12-21 10:21:14,934] multiqc [DEBUG ] No samples found: skewer [2022-12-21 10:21:14,960] multiqc [DEBUG ] No samples found: sortmerna [2022-12-21 10:21:14,977] multiqc [DEBUG ] No samples found: biobloomtools [2022-12-21 10:21:14,994] multiqc [DEBUG ] No samples found: fastq_screen [2022-12-21 10:21:15,011] multiqc [DEBUG ] No samples found: afterqc [2022-12-21 10:21:15,033] multiqc [DEBUG ] No samples found: fastp [2022-12-21 10:21:15,844] multiqc.modules.fastqc.fastqc [INFO ] Found 24 reports [2022-12-21 10:21:16,204] multiqc [DEBUG ] No samples found: pycoqc [2022-12-21 10:21:16,214] multiqc [DEBUG ] No samples found: minionqc [2022-12-21 10:21:16,236] multiqc [DEBUG ] No samples found: multivcfanalyzer [2022-12-21 10:21:16,255] multiqc [DEBUG ] No samples found: clusterflow [2022-12-21 10:21:16,273] multiqc [DEBUG ] No samples found: bcl2fastq [2022-12-21 10:21:16,296] multiqc [DEBUG ] No samples found: interop [2022-12-21 10:21:16,311] multiqc [DEBUG ] No samples found: ivar [2022-12-21 10:21:16,329] multiqc [DEBUG ] No samples found: flash [2022-12-21 10:21:16,339] multiqc [DEBUG ] No samples found: seqyclean [2022-12-21 10:21:16,339] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found. [2022-12-21 10:21:16,339] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane Statistics'. [2022-12-21 10:21:16,339] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane 1 Demultiplexing Report'. [2022-12-21 10:21:16,339] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2022-12-21 10:21:16,339] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2022-12-21 10:21:16,369] multiqc [INFO ] Compressing plot data [2022-12-21 10:21:16,777] multiqc [INFO ] Report : multiqc_report.html [2022-12-21 10:21:16,777] multiqc [INFO ] Data : multiqc_data [2022-12-21 10:21:16,777] multiqc [DEBUG ] Moving data file from '/state/partition1/job-28504443/tmp2hza5z0o/multiqc_data' to '/scratch/gencore/logs/html/HKTM3DRX2/1/multiqc_data' [2022-12-21 10:21:17,088] multiqc [INFO ] MultiQC complete