Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HKTHMAFX3_n01_as3-1 HKTHMAFX3_n01_as3-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 5893289.0 0.0 76.0 40.0 27.178810587953773 76.0 pass pass pass pass fail fail pass pass fail pass fail HKTHMAFX3_n01_as3-10 HKTHMAFX3_n01_as3-10.fastq.gz Conventional base calls Sanger / Illumina 1.9 7769278.0 0.0 76.0 43.0 20.414077524786652 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-11 HKTHMAFX3_n01_as3-11.fastq.gz Conventional base calls Sanger / Illumina 1.9 4759490.0 0.0 76.0 39.0 43.977395767473375 76.0 pass pass pass pass warn warn pass pass fail pass fail HKTHMAFX3_n01_as3-12 HKTHMAFX3_n01_as3-12.fastq.gz Conventional base calls Sanger / Illumina 1.9 6199479.0 0.0 76.0 39.0 29.607882457546488 76.0 pass pass pass pass fail fail pass pass fail pass fail HKTHMAFX3_n01_as3-13 HKTHMAFX3_n01_as3-13.fastq.gz Conventional base calls Sanger / Illumina 1.9 5955584.0 0.0 76.0 39.0 26.870799997757423 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-14 HKTHMAFX3_n01_as3-14.fastq.gz Conventional base calls Sanger / Illumina 1.9 6365052.0 0.0 76.0 42.0 29.107445335745624 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-15 HKTHMAFX3_n01_as3-15.fastq.gz Conventional base calls Sanger / Illumina 1.9 5357848.0 0.0 76.0 42.0 31.98566092931558 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-16 HKTHMAFX3_n01_as3-16.fastq.gz Conventional base calls Sanger / Illumina 1.9 6517418.0 0.0 76.0 43.0 35.350474768023524 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-2 HKTHMAFX3_n01_as3-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 4165583.0 0.0 76.0 41.0 35.268784635152116 76.0 pass pass pass pass fail warn pass pass fail pass fail HKTHMAFX3_n01_as3-3 HKTHMAFX3_n01_as3-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 4739455.0 0.0 76.0 42.0 34.08276661268974 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-4 HKTHMAFX3_n01_as3-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 7096164.0 0.0 76.0 35.0 45.00161793185142 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-5 HKTHMAFX3_n01_as3-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 4977142.0 0.0 76.0 40.0 37.962266835844076 76.0 pass pass pass pass fail warn pass pass fail pass fail HKTHMAFX3_n01_as3-6 HKTHMAFX3_n01_as3-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 17400470.0 0.0 76.0 39.0 15.251416043452714 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n01_as3-7 HKTHMAFX3_n01_as3-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 7083649.0 0.0 76.0 41.0 31.794536131612393 76.0 pass pass pass pass fail warn pass pass fail pass fail HKTHMAFX3_n01_as3-8 HKTHMAFX3_n01_as3-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 7586950.0 0.0 76.0 41.0 21.505004848102587 76.0 pass pass pass pass fail fail pass pass fail pass fail HKTHMAFX3_n01_as3-9 HKTHMAFX3_n01_as3-9.fastq.gz Conventional base calls Sanger / Illumina 1.9 4888671.0 0.0 76.0 38.0 37.664657071098304 76.0 pass pass pass pass fail fail pass pass fail pass fail HKTHMAFX3_n01_undetermined HKTHMAFX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 3970009.0 0.0 76.0 42.0 57.46956321022524 76.0 pass pass pass pass fail fail pass pass warn pass fail HKTHMAFX3_n02_as3-1 HKTHMAFX3_n02_as3-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 5893289.0 0.0 76.0 38.0 27.856935485483298 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-10 HKTHMAFX3_n02_as3-10.fastq.gz Conventional base calls Sanger / Illumina 1.9 7769278.0 0.0 76.0 39.0 20.320980578216574 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-11 HKTHMAFX3_n02_as3-11.fastq.gz Conventional base calls Sanger / Illumina 1.9 4759490.0 0.0 76.0 38.0 50.62877830089594 76.0 pass pass pass pass fail fail pass pass warn warn fail HKTHMAFX3_n02_as3-12 HKTHMAFX3_n02_as3-12.fastq.gz Conventional base calls Sanger / Illumina 1.9 6199479.0 0.0 76.0 37.0 29.49767770143766 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-13 HKTHMAFX3_n02_as3-13.fastq.gz Conventional base calls Sanger / Illumina 1.9 5955584.0 0.0 76.0 38.0 27.85138953980461 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-14 HKTHMAFX3_n02_as3-14.fastq.gz Conventional base calls Sanger / Illumina 1.9 6365052.0 0.0 76.0 39.0 29.306899614108257 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-15 HKTHMAFX3_n02_as3-15.fastq.gz Conventional base calls Sanger / Illumina 1.9 5357848.0 0.0 76.0 39.0 33.86913615727988 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-16 HKTHMAFX3_n02_as3-16.fastq.gz Conventional base calls Sanger / Illumina 1.9 6517418.0 0.0 76.0 39.0 33.97024849078856 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-2 HKTHMAFX3_n02_as3-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 4165583.0 0.0 76.0 38.0 34.73382686723897 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-3 HKTHMAFX3_n02_as3-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 4739455.0 0.0 76.0 38.0 33.12866717174084 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-4 HKTHMAFX3_n02_as3-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 7096164.0 0.0 76.0 35.0 41.94791538026926 76.0 pass pass pass pass fail fail pass pass fail pass fail HKTHMAFX3_n02_as3-5 HKTHMAFX3_n02_as3-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 4977142.0 0.0 76.0 38.0 33.586397918143675 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-6 HKTHMAFX3_n02_as3-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 17400470.0 0.0 76.0 38.0 18.5111443141588 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-7 HKTHMAFX3_n02_as3-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 7083649.0 0.0 76.0 37.0 28.32999437951135 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-8 HKTHMAFX3_n02_as3-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 7586950.0 0.0 76.0 38.0 21.284102744661016 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_as3-9 HKTHMAFX3_n02_as3-9.fastq.gz Conventional base calls Sanger / Illumina 1.9 4888671.0 0.0 76.0 37.0 36.27198793180761 76.0 pass pass pass pass fail fail pass pass fail warn fail HKTHMAFX3_n02_undetermined HKTHMAFX3_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 3970009.0 0.0 76.0 42.0 47.74872673619177 76.0 pass pass pass pass fail fail pass pass fail fail fail