HKT2VAFX2_n02_vk9-8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKT2VAFX2_n02_vk9-8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4466825
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	20321	0.4549316348860768	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAGGGG	10910	40.867905	70
CCGGATC	3710	34.433098	55
CGTATCA	18075	33.595284	56
CCGTATC	18035	33.59217	55
CGGATCA	3915	32.719486	56
CGCCGTA	19245	32.42579	53
GTCGCCC	4070	32.41752	50
GTATCAT	17935	32.413097	57
CTCGGGG	2370	32.19076	44
TCGCCCG	2055	32.01794	51
TCGCCGT	19410	31.93377	52
CCCGATC	1075	31.906178	54
GTCGCCG	24980	31.761904	51
TCATTAA	23110	31.514809	60
CATTAAA	23695	31.402111	61
GCCGTAT	20260	31.285	54
TCGCCGG	5480	31.230968	52
GATCTCG	25150	31.184	41
TCTCGGG	2290	31.023684	43
CGCCCTA	2155	31.020105	52