HKT2VAFX2_n01_vk9-6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKT2VAFX2_n01_vk9-6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3681035
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6081	0.165198103250852	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTCACG	610	54.507328	12
AGGTCAC	770	43.18113	11
GTGAGGT	615	41.544056	42
GGAAAAA	55995	41.28428	70
GCCGTGG	11280	40.987823	56
CTCGGGT	3490	40.6154	49
GAAAAAA	35180	40.451317	70
TCTCGGG	4285	40.431095	48
GAAGATC	10695	40.41983	5
AAAGATC	13180	40.39449	5
CCGTGGT	11820	40.299698	57
CCGGGGT	13670	40.120064	57
CGTGGTG	12370	39.80939	58
GTGAGAT	3190	39.39237	4
GGTCGGC	1870	39.304188	61
TGCCGGG	16235	39.17092	55
ATCTCGG	9135	38.849957	47
GGGTGGA	16065	38.801125	66
TGCCGTG	16175	38.580532	55
CGGGTGC	3135	38.404495	51