Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HKNNLAFX3_n01_10x_Pura_r1 HKNNLAFX3_n01_10x_Pura_r1.fastq.gz Conventional base calls Sanger / Illumina 1.9 91958370.0 0.0 28.0 45.0 14.142684018529497 28.0 pass pass pass pass pass pass pass pass fail pass pass HKNNLAFX3_n01_10x_Pura_r2 HKNNLAFX3_n01_10x_Pura_r2.fastq.gz Conventional base calls Sanger / Illumina 1.9 68206874.0 0.0 28.0 46.0 21.782956094805755 28.0 pass pass pass pass pass pass pass pass fail pass pass HKNNLAFX3_n01_undetermined HKNNLAFX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 7059207.0 0.0 28.0 45.0 59.62944293455303 28.0 pass pass pass pass pass pass pass pass warn pass pass HKNNLAFX3_n02_10x_Pura_r1 HKNNLAFX3_n02_10x_Pura_r1.fastq.gz Conventional base calls Sanger / Illumina 1.9 91958370.0 0.0 90.0 41.0 19.12789532648003 90.0 pass pass pass pass fail warn pass pass fail fail pass HKNNLAFX3_n02_10x_Pura_r2 HKNNLAFX3_n02_10x_Pura_r2.fastq.gz Conventional base calls Sanger / Illumina 1.9 68206874.0 0.0 90.0 42.0 23.019047094487536 90.0 pass pass pass pass fail pass pass pass fail warn pass HKNNLAFX3_n02_undetermined HKNNLAFX3_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 7059207.0 0.0 90.0 43.0 38.11336962106064 90.0 pass pass pass pass warn fail pass pass fail fail pass