HKMVWAFXY_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKMVWAFXY_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4602359
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCCGC	25	3.8741273E-5	45.03634	45
CCTGAGC	20	7.047139E-4	44.984898	13
GTCGCCC	315	0.0	40.747166	45
TGGTCCC	45	1.9175786E-8	40.03056	43
GTCGCCG	580	0.0	37.271454	45
TGTCGCC	100	0.0	36.028286	44
GGTCGCC	875	0.0	35.770943	44
TGGTCGC	1060	0.0	33.138504	43
GTCCCCC	35	2.808352E-4	32.168816	45
GTAGCCC	150	0.0	30.02423	45
CCGGTTG	30	0.0051285625	30.02423	45
GTCCCCG	30	0.0051285625	30.02423	45
GGCGCCC	75	1.6916601E-9	30.02423	45
GCCGTTG	30	0.0051285625	30.02423	45
CCCATTA	30	0.0051285625	30.02423	45
CCGTTGG	60	2.4045949E-7	30.02423	45
CGACGCC	45	3.474422E-5	30.023573	44
GTGCCGT	30	0.0051291087	30.023573	44
GTCTCAC	30	0.005129655	30.022923	43
TAACCCT	30	0.005129655	30.022923	43