FastQCFastQC Report
Tue 19 Apr 2022
HKMN3AFX3_n02_HTO_A_220412.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHKMN3AFX3_n02_HTO_A_220412.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17327930
Sequences flagged as poor quality0
Sequence length116
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1843041.0636238719800923No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)