Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HKLYGBGXC_n01_PACT_M1 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 41181744.0 pass warn warn 55.0 6.70861268507 HKLYGBGXC_n01_PACT_M1.fastq.gz pass pass HKLYGBGXC_n01_PACT_M10 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 47252177.0 pass fail warn 54.0 9.10384197186 HKLYGBGXC_n01_PACT_M10.fastq.gz pass pass HKLYGBGXC_n01_PACT_M2 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 44496882.0 pass warn warn 56.0 11.1105487626 HKLYGBGXC_n01_PACT_M2.fastq.gz pass pass HKLYGBGXC_n01_PACT_M3 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 9416357.0 pass warn fail 55.0 8.99945165426 HKLYGBGXC_n01_PACT_M3.fastq.gz pass pass HKLYGBGXC_n01_PACT_M4 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 50246823.0 pass fail warn 52.0 7.31474830947 HKLYGBGXC_n01_PACT_M4.fastq.gz pass pass HKLYGBGXC_n01_PACT_M5 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 53089235.0 pass warn fail 56.0 7.57979801593 HKLYGBGXC_n01_PACT_M5.fastq.gz pass pass HKLYGBGXC_n01_PACT_M6 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 64326380.0 pass fail fail 52.0 7.60471993481 HKLYGBGXC_n01_PACT_M6.fastq.gz pass pass HKLYGBGXC_n01_PACT_M7 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 46507561.0 pass warn warn 57.0 13.9133935287 HKLYGBGXC_n01_PACT_M7.fastq.gz pass pass HKLYGBGXC_n01_PACT_M8 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 54858825.0 pass warn warn 56.0 6.87837324933 HKLYGBGXC_n01_PACT_M8.fastq.gz pass pass HKLYGBGXC_n01_PACT_M9 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 53137085.0 pass warn fail 57.0 8.21041546986 HKLYGBGXC_n01_PACT_M9.fastq.gz pass pass HKLYGBGXC_n01_PACT_NEG1 warn 0.0 warn 101.0 Sanger / Illumina 1.9 warn pass pass 101.0 Conventional base calls pass warn 26378.0 pass warn warn 55.0 53.832739404 HKLYGBGXC_n01_PACT_NEG1.fastq.gz fail pass HKLYGBGXC_n01_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 29737166.0 pass pass pass 47.0 15.7873890964 HKLYGBGXC_n01_undetermined.fastq.gz pass pass HKLYGBGXC_n02_PACT_M1 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 41181744.0 pass warn warn 55.0 9.81629213739 HKLYGBGXC_n02_PACT_M1.fastq.gz pass pass HKLYGBGXC_n02_PACT_M10 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 47252177.0 pass fail warn 54.0 11.3411847761 HKLYGBGXC_n02_PACT_M10.fastq.gz pass pass HKLYGBGXC_n02_PACT_M2 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 44496882.0 pass warn warn 56.0 15.4753905715 HKLYGBGXC_n02_PACT_M2.fastq.gz pass pass HKLYGBGXC_n02_PACT_M3 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 9416357.0 pass fail warn 54.0 21.119486624 HKLYGBGXC_n02_PACT_M3.fastq.gz pass pass HKLYGBGXC_n02_PACT_M4 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 50246823.0 pass fail warn 52.0 10.1354075711 HKLYGBGXC_n02_PACT_M4.fastq.gz pass pass HKLYGBGXC_n02_PACT_M5 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 53089235.0 pass fail warn 56.0 10.825802151 HKLYGBGXC_n02_PACT_M5.fastq.gz pass pass HKLYGBGXC_n02_PACT_M6 warn 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 64326380.0 pass fail warn 52.0 10.8886453936 HKLYGBGXC_n02_PACT_M6.fastq.gz pass pass HKLYGBGXC_n02_PACT_M7 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 46507561.0 pass warn warn 57.0 16.6360899115 HKLYGBGXC_n02_PACT_M7.fastq.gz pass pass HKLYGBGXC_n02_PACT_M8 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 54858825.0 pass warn warn 56.0 11.0747152571 HKLYGBGXC_n02_PACT_M8.fastq.gz pass pass HKLYGBGXC_n02_PACT_M9 pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass warn 53137085.0 pass fail warn 57.0 11.6936475791 HKLYGBGXC_n02_PACT_M9.fastq.gz pass pass HKLYGBGXC_n02_PACT_NEG1 warn 0.0 warn 101.0 Sanger / Illumina 1.9 warn pass pass 101.0 Conventional base calls pass warn 26378.0 pass warn warn 53.0 62.7492607476 HKLYGBGXC_n02_PACT_NEG1.fastq.gz fail pass HKLYGBGXC_n02_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail pass pass 101.0 Conventional base calls pass fail 29737166.0 pass pass warn 46.0 21.2205320631 HKLYGBGXC_n02_undetermined.fastq.gz pass pass