HKKJCDRXX_l02_n02_ds2124-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds2124-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18813450
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	558050	2.9662289479069495	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	78355	0.4164839516409803	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	61865	43.046745	45
GGTCGCC	65050	40.93562	44
GTGGTCG	66500	39.900826	42
TGGTCGC	68040	39.007748	43
GGTGGTC	68515	38.749725	41
CGGTGGT	69690	38.138363	40
CTCGGTG	70395	37.877865	38
TCTCGGT	71195	37.603233	37
TCGGTGG	71970	37.120647	39
ATCTCGG	72350	37.030922	36
GATCTCG	76470	35.02991	35
AGATCTC	80595	33.558052	34
GCACACG	6625	32.70515	18
TAGATCT	84810	31.916937	33
CACACGT	5840	30.975958	19
AGTGTAG	86035	30.874332	29
GAGTGTA	86655	30.702606	28
GTAGATC	87720	30.345398	32
GTGTAGA	88060	30.197573	30
TGTAGAT	89075	29.903996	31