HKKJCDRXX_l02_n02_ds2123-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds2123-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17590204
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	732009	4.161458275299138	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	72897	0.414418161381187	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	79805	43.26863	45
GGTCGCC	83510	41.319576	44
GTGGTCG	85675	40.214798	42
TGGTCGC	87210	39.49172	43
GGTGGTC	87830	39.212166	41
CGGTGGT	88850	38.807587	40
CTCGGTG	89190	38.71756	38
TCTCGGT	89995	38.42319	37
TCGGTGG	90565	38.174454	39
ATCTCGG	91365	37.898754	36
GATCTCG	95265	36.349705	35
AGATCTC	99260	35.09298	34
TAGATCT	103175	33.778812	33
AGTGTAG	104710	32.881916	29
GAGTGTA	105420	32.730793	28
GTAGATC	105835	32.59191	32
GTGTAGA	106405	32.423664	30
TGTAGAT	107025	32.23373	31
AGAGTGT	109030	31.649223	27
AAGAGTG	110495	31.292725	26